BS27523.complete Sequence
1634 bp assembled on 2011-10-14
GenBank Submission: KX804188
> BS27523.complete
GAAGTTATCAGTCGACATGTACCTAATAATCATCGCCCTGCTTGCAAGTG
TATCCGCTTTAGGCCGCCCAGACTTGGAGGACTACTGCAATGATTCCTAT
TGCCATTTACTTGGTCGGAGCCGGACGTTTAGCGATAAGAAGGCTACCAA
ACTAACCGAGTTCCACATGGACTCCTGCGAAAAGAAGGTACTCAAACTTA
TGCCCAATCTGCGCACCCTGGAGCTGGAGAACTGCGACAGTCCGGACTTC
ACCATGAACGACCTGAATCAACTGCCGTACCTAACAAGCCTTCAATTGCG
ACGTGGAAATCTTTTGGGGCTGCACGACGAGCACTTCTCGAAGTGGCCAA
ACATGAAGATCCTTATGCTGGGGGGGAACAACATAACGAGACTATCCAAT
GAATGCTTTAAAGGCCTAGCTCAGCTCTGGCTGCTGTCTCTGCCGGGGAA
TGGTATTCAAGGTTTGCCATGGGATGTATTTCAAAACCTACCAGAACTTC
TGCATCTCGACCTAAGTGGCAATAGAATCGAAACTCTTCACGAAAACATT
TTTACAGGCGTTCCCAAGCTAGAGATGCTGCTACTCAATGGGAATCCCTT
GACATGGATAGCGCCTACGTCTCTAAAATCTCTAAGTAACCTACGCCTTT
TGGACATGAGCAACTGTGGACCGCTGCCGGATCTTTCATTGCCCGGTGCA
CATACCTTGATCCTCGACAACAGCGGTGTGCAGCGCCTGGACATTTTGGG
CAGTGTCCATAAACTCCAGGCGAGGAAAAACCATATAACCGAGATTAAAT
TACCCGACAAAAGCTCTGTTATCGAACTGGATTTGCATAGCAATTTACTG
ACCGCTACCGATATTCCCAAACTTCTAACGGGCATGTGGCGACTGCAACG
ACTGGATCTATCCGAGAATATCATAGGGATATACGCAGCCGCCGGAAGCG
ACAATACGAGCGAGCTCTTCATACTTCCCAATCTTATGTATATGAACCTA
TCGGCAAATCGCCTGACGCGTCTGCACTTCGATTCGCCAATTCCATGGGA
AAGGCTTACTCATTTGGACGCTTCGTACAATAGAATATATGCTCCCGCAA
AGGTTGGCATTGACGAAGCTTTCAATCTTCAAAGTTTGCATTTGGAGGGA
AATTATATTAACAATTTTGAACTTACACCCTGGAAACCTCATCCAAGTCT
GAAAGAGGTTGCTCTGTACGATAATAAATTCCAGCCTAAGGGCTATAAAA
ATATTACAAAGTTCTTCAATGAAATTGGAGTAAACGTCTTAGAGAAAACG
CAATACAGTCAATCAAACAACACGACTCCAACTTGTAAGCCGTGCATACC
AGATGCCAGAGATTTTCCTACGAGTATAAGCGCCGACACAAACCAAACCA
TAGATACCAAAGTTAATCCTTTAAGCAACGACACTTATCAATGGAATGTA
TGGAACGTACTGATGCTAGTTTCCCTGATTGTTTCCTTGTTCGTAAACTC
TTTTCTAATCGTGAAACTCATTCGTTTGAGAGGAAGAAACCAGTTCACGC
AATCATCATCGGTACCTGCCATAATCGAAATGTTTTCAAACGAATCTGAT
GATGAAATTATCCTGTAAAAGCTTTCTAGACCAT
BS27523.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:50:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7800-RA | 1602 | CG7800-PA | 1..1602 | 17..1618 | 7995 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:50:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7800-RA | 1778 | CG7800-RA | 105..1706 | 17..1618 | 7995 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:50:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8218061..8219662 | 17..1618 | 7995 | 99.9 | Plus |
Blast to na_te.dros performed 2014-11-26 16:50:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 2733..2872 | 1295..1429 | 121 | 56.4 | Plus |
BS27523.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-10-14 10:56:44 Download gff for
BS27523.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7800-RA | 84..1683 | 17..1616 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:11:07 Download gff for
BS27523.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7800-RA | 105..1704 | 17..1616 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:28:40 Download gff for
BS27523.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7800-RA | 105..1704 | 17..1616 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:28:40 Download gff for
BS27523.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8218061..8219660 | 17..1616 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:11:07 Download gff for
BS27523.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4043783..4045382 | 17..1616 | 99 | | Plus |
BS27523.pep Sequence
Translation from 16 to 1617
> BS27523.pep
MYLIIIALLASVSALGRPDLEDYCNDSYCHLLGRSRTFSDKKATKLTEFH
MDSCEKKVLKLMPNLRTLELENCDSPDFTMNDLNQLPYLTSLQLRRGNLL
GLHDEHFSKWPNMKILMLGGNNITRLSNECFKGLAQLWLLSLPGNGIQGL
PWDVFQNLPELLHLDLSGNRIETLHENIFTGVPKLEMLLLNGNPLTWIAP
TSLKSLSNLRLLDMSNCGPLPDLSLPGAHTLILDNSGVQRLDILGSVHKL
QARKNHITEIKLPDKSSVIELDLHSNLLTATDIPKLLTGMWRLQRLDLSE
NIIGIYAAAGSDNTSELFILPNLMYMNLSANRLTRLHFDSPIPWERLTHL
DASYNRIYAPAKVGIDEAFNLQSLHLEGNYINNFELTPWKPHPSLKEVAL
YDNKFQPKGYKNITKFFNEIGVNVLEKTQYSQSNNTTPTCKPCIPDARDF
PTSISADTNQTIDTKVNPLSNDTYQWNVWNVLMLVSLIVSLFVNSFLIVK
LIRLRGRNQFTQSSSVPAIIEMFSNESDDEIIL*
BS27523.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:30:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7800-PA | 533 | CG7800-PA | 1..533 | 1..533 | 2793 | 100 | Plus |
| CG18249-PB | 559 | CG18249-PB | 14..559 | 3..530 | 698 | 35.4 | Plus |
| CG18249-PC | 555 | CG18249-PC | 14..507 | 3..493 | 697 | 36.3 | Plus |
| 18w-PA | 1385 | CG8896-PA | 216..538 | 77..383 | 249 | 28.7 | Plus |
| CG6749-PA | 552 | CG6749-PA | 110..451 | 25..404 | 232 | 26.8 | Plus |
| 18w-PA | 1385 | CG8896-PA | 259..650 | 39..403 | 199 | 25.5 | Plus |
| 18w-PA | 1385 | CG8896-PA | 58..440 | 9..404 | 162 | 24.6 | Plus |
