BS27551.complete Sequence
947 bp assembled on 2011-09-12
GenBank Submission: KX805113
> BS27551.complete
GAAGTTATCAGTCGACATGGCAGGTGCAACAAATGCGGACATCAAGCGGG
TTCTATCCATCCAGAGCCATGTGGTCCACGGCTATGTGGGAAACAAGGTG
GCCACCTATCCACTGCAGCTGCTGGGTTTCGATGTGGATCCACTGAACTC
GGTCCAGTTCTCCAATCATACGGGCTACAAGACCTTTAAGGGTCCCGTCT
CCAATGAAAAGGAATTAGCCACCATTTTCGAGGGTCTGGAGGAGAACGAG
CTGCTGCCATTGTACTCACACCTCTTGACCGGCTACATTGGAAATCCATT
GTTCCTACGCCAGGTGGGCCACATTCTCAAGAAGCTGCGTCAGGCTAATC
CTGGCCTGGTGTACGTCTGTGATCCGGTTATGGGTGACAATGGTCAGCTC
TATGTGCCCAAGGAGCTCTTGCCCGTGTATCGGGACGAGATCATTCCACT
AGCGGACATCATCACTCCCAATCAATTCGAAGTGGAGCTGCTCACGGAAA
AGGAGGTACGCAGCGAGGCGGCTGTTTGGGAGGCAATGGAGTGGTTCCAT
CAGCGTGGCATCAAGACTGTGGTCATTTCCAGCAGTGATCTTGGCCAGCC
TGGCGTTCTGCGTGCTTTCCTTAGCCAGCAGAATGGTCCCCGCCTGGCCA
TTGATATTCCGAAGCAGGGTGGCAAGGATTTGGTCTTCACTGGCACCGGC
GATCTCTTCGCCTCCCTTTTCCTGGCCCACAGTCATGGCAGCAAGGATAT
AGCCAATGTTTTCGAGAAAACCATCGCCAGTTTGCAGGCGGTGATCAAGC
GAACTGTGGCTTCGCTGCCCAACGGTGGAAACGGCCCAGTCAAAGCAGCC
GAACGGGAACTAAAGCTGGTGCAGTCCAAGACGGAAATTGAACAGCCCCA
GGTGCTCCTCAAAGCGCAGCGACTTAACTAGAAGCTTTCTAGACCAT
BS27551.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:57:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pdxk-RC | 915 | CG34455-PC | 1..915 | 17..931 | 4575 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:57:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pdxk-RC | 1590 | CG34455-RC | 355..1270 | 17..932 | 4580 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:57:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9361007..9361722 | 217..932 | 3580 | 100 | Plus |
| 3L | 28110227 | 3L | 9360670..9360771 | 17..118 | 510 | 100 | Plus |
| 3L | 28110227 | 3L | 9360841..9360942 | 117..218 | 510 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 06:57:45 has no hits.
BS27551.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-12 10:53:24 Download gff for
BS27551.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34455-RC | 359..1273 | 17..931 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:00:28 Download gff for
BS27551.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34455-RC | 355..1269 | 17..931 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:59:11 Download gff for
BS27551.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pdxk-RC | 355..1269 | 17..931 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:59:11 Download gff for
BS27551.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9360670..9360771 | 17..118 | 100 | -> | Plus |
| 3L | 9360843..9360942 | 119..218 | 100 | -> | Plus |
| 3L | 9361009..9361721 | 219..931 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:00:28 Download gff for
BS27551.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9353770..9353871 | 17..118 | 100 | -> | Plus |
| arm_3L | 9353943..9354042 | 119..218 | 100 | -> | Plus |
| arm_3L | 9354109..9354821 | 219..931 | 100 | | Plus |
BS27551.pep Sequence
Translation from 16 to 930
> BS27551.pep
MAGATNADIKRVLSIQSHVVHGYVGNKVATYPLQLLGFDVDPLNSVQFSN
HTGYKTFKGPVSNEKELATIFEGLEENELLPLYSHLLTGYIGNPLFLRQV
GHILKKLRQANPGLVYVCDPVMGDNGQLYVPKELLPVYRDEIIPLADIIT
PNQFEVELLTEKEVRSEAAVWEAMEWFHQRGIKTVVISSSDLGQPGVLRA
FLSQQNGPRLAIDIPKQGGKDLVFTGTGDLFASLFLAHSHGSKDIANVFE
KTIASLQAVIKRTVASLPNGGNGPVKAAERELKLVQSKTEIEQPQVLLKA
QRLN*
BS27551.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:12:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pdxk-PC | 304 | CG34455-PC | 1..304 | 1..304 | 1554 | 100 | Plus |
