BS27574.complete Sequence
791 bp assembled on 2011-09-12
GenBank Submission: KX801417
> BS27574.complete
GAAGTTATCAGTCGACATGCAGCGCGACGAAAAGCTTTTTGAGCTGACGC
TGGATACGGTCCTTCAGCGTCTGAACGACCTGAAGCTGGCGGTTCTCTCG
ATGATCCAAAAACTTGAGCTAGAGTACGAGACCATCAACTGGCCGACTTT
CCTGGACAACTTTGCCATTATCTCAAGTCACTTGACGGGATTGACGAAAA
TCTTGGCAAAGGAGCAGTGTCCGCCGCTAAGAAATCGAACGGTCCTGCCC
CTTCTGGTCTCCATGGACCGGGATGACACCCTCATCAACATCACAGAGGG
TCGGGTGCCAGTCTTTTCACACGACATTGTTCCAGACTATTTGAGAACTC
GGCCGGATCCGATTACGGAACAGAAAATGCTGCAGAACGAACAGAAGGCG
GCGAACCTCACCAACGACGCTGCCATGAAACAGGTCACTCAATACAACAA
GGTCGTCTCCCACGTCCTGGATATGGTCAGCAAAGCGCGCGAGGAGTGGG
AAATCGAGAGCTCTTCGCGCACCGGCATCCAGCAGACGAGTAGCATGGCC
GACACACAGCTCCTGGTGGCCGCCGTGGGTATGGGAAAAGGACTCAAGCT
GACCAACTATGGACCCGGACCTGGCATGATGGTACCGCCTTCAATTCGAG
CACCCTCGCCAATGGGTGGACCCGCTATGAGTCCCGGCAACGTGCAGCAG
CAGCTGGGAAAGGCGCCATCGGCTGTGAAAACAAACATCAAGTCCGCAAA
TCAAGTGCATCCGTTCTCTCGATAAAAGCTTTCTAGACCAT
BS27574.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:51:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
MED8-RA | 759 | CG13867-PA | 1..759 | 17..775 | 3795 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:51:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
MED8-RA | 963 | CG13867-RA | 85..845 | 17..777 | 3805 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:51:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20325962..20326722 | 777..17 | 3805 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 06:51:10 has no hits.
BS27574.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-12 10:53:20 Download gff for
BS27574.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MED8-RA | 85..841 | 17..773 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:56:30 Download gff for
BS27574.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MED8-RA | 85..841 | 17..773 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:56:08 Download gff for
BS27574.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MED8-RA | 85..841 | 17..773 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:56:08 Download gff for
BS27574.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20325966..20326722 | 17..773 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:56:30 Download gff for
BS27574.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16213471..16214227 | 17..773 | 100 | | Minus |
BS27574.pep Sequence
Translation from 16 to 774
> BS27574.pep
MQRDEKLFELTLDTVLQRLNDLKLAVLSMIQKLELEYETINWPTFLDNFA
IISSHLTGLTKILAKEQCPPLRNRTVLPLLVSMDRDDTLINITEGRVPVF
SHDIVPDYLRTRPDPITEQKMLQNEQKAANLTNDAAMKQVTQYNKVVSHV
LDMVSKAREEWEIESSSRTGIQQTSSMADTQLLVAAVGMGKGLKLTNYGP
GPGMMVPPSIRAPSPMGGPAMSPGNVQQQLGKAPSAVKTNIKSANQVHPF
SR*
BS27574.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:12:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
MED8-PA | 252 | CG13867-PA | 1..252 | 1..252 | 1283 | 100 | Plus |