BS27581.complete Sequence
1556 bp assembled on 2011-10-14
GenBank Submission: KX801202
> BS27581.complete
GAAGTTATCAGTCGACATGTATCTAGAGCTCTTTGCGATTCTCCTGGCGA
CCGCTTTGGCGTGGGATTATATGCGAAAGAGGCGGCACAACAAGATGTAC
GCCGAGGCTGGGATACGAGGACCCAAGAGCTATCCTCTGGTTGGAAACGC
TCCCTTGTTGATTAACGAGTCACCCAAGACTATCTTTGATATGCAGTTCC
GACTGATTGCTGAGTTTGGTAAAAACATAAAAACGCAGATGTTGGGCGAA
AGTGGCTTCATGACCGCTGATTCCAAAATGATCGAGGCGATCATGAGCAG
CCAACAGACCATTCAAAAAAACAATCTTTATAGTCTGCTGGTAAATTGGC
TCGGCGATGGACTGCTCATTAGCCAAGGAAAGAAGTGGTTCCGCCGCAGG
AAGATCATTACACCCGCATTCCACTTTAAGATCCTCGAGGACTTTGTGGA
GGTCTTTGACCAACAGAGCGCAACTATGGTCCAGAAGCTTTACGATCGGG
CAGACGGCAAGACGGTGATAAACATGTTCCCGGTGGCTTGCTTGTGTGCC
ATGGATATCATTGCGGAAACGGCCATGGGTGTAAAAATTAATGCTCAGCT
CCAGCCGCAATTTACCTACGTTCAGTCGGTCACAACTGCCTCTGCAATGT
TAGCCGAACGCTTCATGAATCCCTTGCAGCGCTTGGATTTCACCATGAAG
CTCTTCTATCCCAAATTGCTAGACAAGCTGAATGATGCCGTGAAGAACAT
GCACGACTTTACCAACTCGGTAATCACTGAGCGACGCGAGCTCCTACAAA
AAGCCATTGCCGATGGAGGAGATGCCGACGCTGCCCTCTTGAACGATGTG
GGCCAGAAGCGTCGTATGGCTCTTCTTGATGTGCTGCTGAAGTCCACCAT
CGATGGGGCTCCGTTGAGCAACGACGACATCCGCGAGGAGGTAGACACCT
TCATGTTCGAGGGTCATGACACTACGACCAGTAGCATTGCTTTTACCTGT
TATTTGCTGGCTCGACATCCTGAGGTTCAGGCTCGCGTCTTCCAGGAGGT
CAGAGATGTTATCGGTGATGACAAGTCGGCTCCAGTTACTATGAAGCTAC
TCGGCGAGCTCAAGTACTTAGAGTGCGTGATAAAGGAGTCTCTGCGCCTG
TTTCCCTCGGTGCCGATCATTGGACGCTACATTTCCCAGGACACCGTACT
CGACGGCAAATTGATACCCGCCGACTCGAATGTGATCATTCTTATTTACC
ATGCTCAGCGCGATCCAGACTACTTCCCTGATCCGGAGAAGTTCATCCCT
GATCGTTTCAGCATGGAGCGCAAGGGCGAGATCAGTCCATTCGCCTATAC
TCCCTTCTCAGCGGGTCCGAGAAACTGCATCGGCCAAAAGTTCGCAATGC
TCGAGATGAAGAGCACCATCAGCAAAATGGTGAGACACTTTGAGTTGCTG
CCTCTGGGCGAAGAAGTCCAGCCCGTACTGAACGTTATCCTGCGCTCGAC
CACCGGAATCAATTGTGGCCTCAAGCCGCGCGTCTATTAGAAGCTTTCTA
GACCAT
BS27581.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:13:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp4d14-RA | 1524 | CG3540-PA | 1..1524 | 17..1540 | 7620 | 100 | Plus |
| Cyp4d14-RB | 1533 | CG3540-PB | 1..1533 | 17..1540 | 7495 | 99.4 | Plus |
| Cyp4d2-RB | 1506 | CG3466-PB | 821..951 | 849..979 | 355 | 84.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:13:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp4d14-RA | 1685 | CG3540-RA | 78..1603 | 15..1540 | 7630 | 100 | Plus |
| Cyp4d14-RB | 1694 | CG3540-RB | 78..1612 | 15..1540 | 7505 | 99.4 | Plus |
| Cyp4d2-RB | 2467 | CG3466-RB | 1722..1852 | 849..979 | 355 | 84.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:13:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2173497..2174400 | 1540..637 | 4520 | 100 | Minus |
| X | 23542271 | X | 2174464..2174920 | 636..180 | 2285 | 100 | Minus |
| X | 23542271 | X | 2175074..2175238 | 179..15 | 825 | 100 | Minus |
| X | 23542271 | X | 2177927..2178057 | 849..979 | 355 | 84.7 | Plus |
| 3L | 28110227 | 3L | 7494248..7494385 | 982..845 | 225 | 77.5 | Minus |
| X | 23542271 | X | 2178482..2178583 | 1351..1452 | 210 | 80.4 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:13:40 has no hits.
BS27581.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-10-14 10:43:16 Download gff for
BS27581.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4d14-RA | 78..1601 | 17..1540 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:55:29 Download gff for
BS27581.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4d14-RA | 80..1603 | 17..1540 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:14:05 Download gff for
BS27581.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4d14-RA | 80..1603 | 17..1540 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:14:05 Download gff for
BS27581.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2173497..2174400 | 637..1540 | 100 | <- | Minus |
| X | 2174464..2174920 | 180..636 | 100 | <- | Minus |
| X | 2175074..2175236 | 17..179 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:55:29 Download gff for
BS27581.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2067530..2068433 | 637..1540 | 100 | <- | Minus |
| arm_X | 2068497..2068953 | 180..636 | 100 | <- | Minus |
| arm_X | 2069107..2069269 | 17..179 | 100 | | Minus |
BS27581.pep Sequence
Translation from 16 to 1539
> BS27581.pep
MYLELFAILLATALAWDYMRKRRHNKMYAEAGIRGPKSYPLVGNAPLLIN
ESPKTIFDMQFRLIAEFGKNIKTQMLGESGFMTADSKMIEAIMSSQQTIQ
KNNLYSLLVNWLGDGLLISQGKKWFRRRKIITPAFHFKILEDFVEVFDQQ
SATMVQKLYDRADGKTVINMFPVACLCAMDIIAETAMGVKINAQLQPQFT
YVQSVTTASAMLAERFMNPLQRLDFTMKLFYPKLLDKLNDAVKNMHDFTN
SVITERRELLQKAIADGGDADAALLNDVGQKRRMALLDVLLKSTIDGAPL
SNDDIREEVDTFMFEGHDTTTSSIAFTCYLLARHPEVQARVFQEVRDVIG
DDKSAPVTMKLLGELKYLECVIKESLRLFPSVPIIGRYISQDTVLDGKLI
PADSNVIILIYHAQRDPDYFPDPEKFIPDRFSMERKGEISPFAYTPFSAG
PRNCIGQKFAMLEMKSTISKMVRHFELLPLGEEVQPVLNVILRSTTGINC
GLKPRVY*
BS27581.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:27:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp4d14-PA | 507 | CG3540-PA | 1..507 | 1..507 | 2599 | 100 | Plus |
| Cyp4d14-PB | 510 | CG3540-PB | 1..510 | 1..507 | 2581 | 99.2 | Plus |
| Cyp4d2-PB | 501 | CG3466-PB | 8..500 | 5..505 | 1364 | 54.3 | Plus |
| Cyp4d2-PA | 501 | CG3466-PA | 8..500 | 5..505 | 1364 | 54.3 | Plus |
| Cyp4d20-PA | 510 | CG16761-PA | 1..506 | 1..505 | 1186 | 46.6 | Plus |
