BS27582.complete Sequence
1544 bp assembled on 2011-09-12
GenBank Submission: KX806320
> BS27582.complete
GAAGTTATCAGTCGACATGGCGATCCTGCTCGGTTTGGTGGTCGGTGTCC
TTACGCTCGTCGCTTGGTGGGTGCTCCAGAACTACACCTACTGGAAACGG
CGAGGAATTCCCCATGATCCACCCAATATTCCGCTCGGCAATACCGGCGA
ACTTTGGAGAACAATGCCGCTGGCCGGCATCCTCAAGCGAACATATCTGA
AATTCAGGAAACAGACCGACGGACCTTTTGCGGGCTTCTACCTCTATGCT
ATGAAGTACATTGTCATCACGGACGTGGATTTTGTAAAAACCGTGCTAAT
TCGCGACTTCGATAAGTTTCACGATCGCGGAGTGTATCACAACGAAAAGG
ATGATCCGCTGACCAATAACCTGGCAACCATCGAGGGTCAAAAGTGGAAA
AATCTGCGACAGAAGCTGACCCACACATTTACGTCAGCCAAAATGAAGAG
CATGTTTTCCACGGTCTTAAACGTGGGCGATGAGATGATTCGCGTGGTCG
ATGAAAAGATCTCCAGTTCTTCGCAGACCCTGGAAGTCACCGACATTGTG
TCACGCTTCACATCCGACGTAATTGGAATCTGTGCTTTTGGCCTGAAATG
CAATAGTCTGCGGGATCCTAAGGCGGAGTTCGTCCAAATGGGCTACTCAG
CGCTAAGAGAACGTCGTCATGGTTGGCTGGTAGATCTACTAATCTTCGGG
ATGCCTAAACTGGCCGTGAAACTGGGTTTCCAGTTCTTGCTTCCCTCGGT
GCAGAAGTTCTATATGAAAATCGTGCAGGACACCATAGATTACAGGATGA
AGAGAAAGGTGACTCGGAACGATTTCATGGACACGTTGATTGACATGAAA
CAGCAGTATGATAAAGGCGACAAGGAAAATGGACTTGCCTTCAATGAGGT
CGCTGCCCAGGCCTTCGTATTTTTCCTAGCTGGTTTTGAGGCGGGATCCA
CAACCATGGGATTCACACTTTATGAGCTGGCCTGCAATCAGGATGTTCAG
GACAAGTTGAGGGCTGAAATCGACAGTGTGCTGGAAAGGTACAATGGTAA
ACTGGAATACGATTCTATGCAGGACTTGTTTTATATGGAAAAGGTTATCA
ATGAATCGCTAAGGAAACATCCAGTGGTAGCCCACTTGGCTCGCATTGCC
ACCAAACCGTACCAGCACAGTAATCCCAAGTATTTCATAGAGGCCGGCAC
TGGAGTGCTGGTGTCCACCCTGGGCATCCATCATGATCCTGAGTTTTATC
CGGAGCCGGAAAAGTTTATCCCAGAACGATTCGATGAAGAGCAAGTAAAG
AAGCGTCCCACCTGCGCTTTCCTACCCTTCGGAGCTGGTCCCCGAAATTG
CATTGGACTCCGATTCGGACGGATGCAGGTCATCATTGGATTGGCCCTGC
TAATCCACAATTTTAGGTTCGAATTGCATCCCAAGACGCCAGTGCCAATG
AAATACACAATCAATAACCTTTTGCTGGGCTCCGAGGGCGGAATCCATCT
CAATATCACCAAGGTAGTGAGAGACTAAAAGCTTTCTAGACCAT
BS27582.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:41:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6a19-RA | 1512 | CG10243-PA | 1..1512 | 17..1528 | 7560 | 100 | Plus |
| Cyp6a19-RB | 1104 | CG10243-PB | 1..1087 | 17..1103 | 5435 | 100 | Plus |
| Cyp6a20-RB | 1505 | CG10245-PB | 802..1416 | 819..1433 | 735 | 74.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:41:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6a19-RA | 1694 | CG10243-RA | 15..1527 | 17..1529 | 7565 | 100 | Plus |
| Cyp6a19-RB | 1903 | CG10243-RB | 15..1517 | 17..1529 | 7380 | 99.3 | Plus |
| Cyp6a20-RB | 1801 | CG10245-RB | 816..1430 | 819..1433 | 735 | 74.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:41:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14877800..14878886 | 17..1103 | 5435 | 100 | Plus |
| 2R | 25286936 | 2R | 14878940..14879366 | 1103..1529 | 2135 | 100 | Plus |
| 2R | 25286936 | 2R | 14883402..14883675 | 1160..1433 | 425 | 77 | Plus |
| 2R | 25286936 | 2R | 14882933..14883116 | 819..1002 | 395 | 81 | Plus |
| 2R | 25286936 | 2R | 14882404..14882597 | 290..483 | 310 | 77.3 | Plus |
| 2R | 25286936 | 2R | 14874868..14874962 | 908..1002 | 220 | 82.1 | Plus |
| 2R | 25286936 | 2R | 14874336..14874414 | 379..457 | 185 | 82.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 06:41:29 has no hits.
BS27582.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-12 10:53:05 Download gff for
BS27582.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a19-RA | 13..1522 | 17..1526 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:50:54 Download gff for
BS27582.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a19-RA | 15..1524 | 17..1526 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:51:51 Download gff for
BS27582.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a19-RA | 15..1524 | 17..1526 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:51:51 Download gff for
BS27582.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14877800..14878886 | 17..1103 | 100 | -> | Plus |
| 2R | 14878941..14879363 | 1104..1526 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:50:54 Download gff for
BS27582.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10765305..10766391 | 17..1103 | 100 | -> | Plus |
| arm_2R | 10766446..10766868 | 1104..1526 | 100 | | Plus |
BS27582.pep Sequence
Translation from 16 to 1527
> BS27582.pep
MAILLGLVVGVLTLVAWWVLQNYTYWKRRGIPHDPPNIPLGNTGELWRTM
PLAGILKRTYLKFRKQTDGPFAGFYLYAMKYIVITDVDFVKTVLIRDFDK
FHDRGVYHNEKDDPLTNNLATIEGQKWKNLRQKLTHTFTSAKMKSMFSTV
LNVGDEMIRVVDEKISSSSQTLEVTDIVSRFTSDVIGICAFGLKCNSLRD
PKAEFVQMGYSALRERRHGWLVDLLIFGMPKLAVKLGFQFLLPSVQKFYM
KIVQDTIDYRMKRKVTRNDFMDTLIDMKQQYDKGDKENGLAFNEVAAQAF
VFFLAGFEAGSTTMGFTLYELACNQDVQDKLRAEIDSVLERYNGKLEYDS
MQDLFYMEKVINESLRKHPVVAHLARIATKPYQHSNPKYFIEAGTGVLVS
TLGIHHDPEFYPEPEKFIPERFDEEQVKKRPTCAFLPFGAGPRNCIGLRF
GRMQVIIGLALLIHNFRFELHPKTPVPMKYTINNLLLGSEGGIHLNITKV
VRD*
BS27582.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:10:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6a19-PA | 503 | CG10243-PA | 1..503 | 1..503 | 2647 | 100 | Plus |
| Cyp6a19-PB | 367 | CG10243-PB | 1..366 | 1..366 | 1894 | 98.9 | Plus |
| Cyp6a20-PB | 501 | CG10245-PB | 1..501 | 1..500 | 1858 | 66.3 | Plus |
| Cyp6a17-PB | 501 | CG10241-PB | 2..501 | 3..502 | 1370 | 50.7 | Plus |
| Cyp6a17-PA | 501 | CG10241-PA | 2..501 | 3..502 | 1370 | 50.7 | Plus |
