BS27586.complete Sequence
1076 bp assembled on 2011-09-12
GenBank Submission: KX801623
> BS27586.complete
GAAGTTATCAGTCGACATGCCGGAAAACCTCGAGCTTCAGCAGTTCCAGG
AGGGCGCCCCGCCCCCAGATCCCGCCCCCCGTTGGCTGGAGCGCTTGCAG
CGACGATTGGGCGCCGATTGTCCCTACTTGGGTATCCTGCTGGCCACGCT
CTCCTCGCTCTTCTTCTCCCTGTGCTCGGTGATTGTGAAGGGACTGGTGG
ACGTGAACCCCATGGAGCTGGCCTCGTTTCGATTCGTCGGAGTCCTGTTG
CCGGCACTGCCCATCCTGATATACACGCGACAGCCGGTGTTTCCGGAGGG
CAAGAGGGTGATACTGCTGCTGCGCTGCTTCATGGGCACAACGGGTCTGA
TGCTCAGCTTCTATGCCTTCCGACACATGCCCCTGGCCGATGCGAGTGTC
ATCATCTTCTCCACGCCCGTTTTCGTGGCCATATTTGCGCGTGCCTTCCT
CAAGGAGCCGTGTACGCTGTTCAATGTCCTGACCATCAATATGACATTGC
TCGGCGTGGTCCTCATCACGCGCCCACCCTTTGTGTTCGGTGACACGGCG
GAGAGTGAGGATGTCGCTGGGAAGACGTACGACATCTGGGGACCAGTGGC
CGCCATATCATCCACACTCTTCGGAGCCAATGTGTACATCCTGCTGCGGG
CGCTCAAAAACCTGCACTTCTCCGTCATCATGACGAATTTCGGTACCATC
GCTCTGGTCTACACACTGATCGTTTGCGCATCTATTGGAGCTGTGTGCTG
GCCAAGCTGCGGACGGGATCGTTGGCTGGTCGTTGTACTGGGCGTATTCA
GCTTCCTGGGCCAGATCCTGCTCACGCTATCGCTGCAGATCGAACAGGCC
GGACCAGTGGCCATTGCTCGCTGCGCCGACATCGTCTTCGCCTTCGTCTG
GCAGATGCTCTTCTTCGGAGAGACGCCCACCGCTTACTCGCTGGTGGGTG
CGGTGATGGTGATGGGATCTGTGGTTCTGACGGCCCTGAAGAAATGGGCA
GGCACCCTGCCACGCGAGTCGTCGCTGCGGAAGCGATTCAGGCTCATCCT
GCTGGAATAGAAGCTTTCTAGACCAT
BS27586.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:59:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5281-RA | 1044 | CG5281-PA | 1..1044 | 17..1060 | 5220 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:59:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5281-RA | 1613 | CG5281-RA | 270..1313 | 17..1060 | 5220 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:59:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11436180..11437223 | 17..1060 | 5220 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 06:59:44 has no hits.
BS27586.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-12 10:53:27 Download gff for
BS27586.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5281-RA | 270..1313 | 17..1060 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:01:47 Download gff for
BS27586.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5281-RA | 270..1313 | 17..1060 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:00:15 Download gff for
BS27586.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5281-RA | 270..1313 | 17..1060 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:00:15 Download gff for
BS27586.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11436180..11437223 | 17..1060 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:01:47 Download gff for
BS27586.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 7261902..7262945 | 17..1060 | 100 | | Plus |
BS27586.pep Sequence
Translation from 16 to 1059
> BS27586.pep
MPENLELQQFQEGAPPPDPAPRWLERLQRRLGADCPYLGILLATLSSLFF
SLCSVIVKGLVDVNPMELASFRFVGVLLPALPILIYTRQPVFPEGKRVIL
LLRCFMGTTGLMLSFYAFRHMPLADASVIIFSTPVFVAIFARAFLKEPCT
LFNVLTINMTLLGVVLITRPPFVFGDTAESEDVAGKTYDIWGPVAAISST
LFGANVYILLRALKNLHFSVIMTNFGTIALVYTLIVCASIGAVCWPSCGR
DRWLVVVLGVFSFLGQILLTLSLQIEQAGPVAIARCADIVFAFVWQMLFF
GETPTAYSLVGAVMVMGSVVLTALKKWAGTLPRESSLRKRFRLILLE*
BS27586.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:12:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5281-PA | 347 | CG5281-PA | 1..347 | 1..347 | 1774 | 100 | Plus |