Clone BS27586 Report

Search the DGRC for BS27586

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:275
Well:86
Vector:pDNR-Dual
Associated Gene/TranscriptCG5281-RA
Protein status:BS27586.pep: full length peptide match
Sequenced Size:1076

Clone Sequence Records

BS27586.complete Sequence

1076 bp assembled on 2011-09-12

GenBank Submission: KX801623

> BS27586.complete
GAAGTTATCAGTCGACATGCCGGAAAACCTCGAGCTTCAGCAGTTCCAGG
AGGGCGCCCCGCCCCCAGATCCCGCCCCCCGTTGGCTGGAGCGCTTGCAG
CGACGATTGGGCGCCGATTGTCCCTACTTGGGTATCCTGCTGGCCACGCT
CTCCTCGCTCTTCTTCTCCCTGTGCTCGGTGATTGTGAAGGGACTGGTGG
ACGTGAACCCCATGGAGCTGGCCTCGTTTCGATTCGTCGGAGTCCTGTTG
CCGGCACTGCCCATCCTGATATACACGCGACAGCCGGTGTTTCCGGAGGG
CAAGAGGGTGATACTGCTGCTGCGCTGCTTCATGGGCACAACGGGTCTGA
TGCTCAGCTTCTATGCCTTCCGACACATGCCCCTGGCCGATGCGAGTGTC
ATCATCTTCTCCACGCCCGTTTTCGTGGCCATATTTGCGCGTGCCTTCCT
CAAGGAGCCGTGTACGCTGTTCAATGTCCTGACCATCAATATGACATTGC
TCGGCGTGGTCCTCATCACGCGCCCACCCTTTGTGTTCGGTGACACGGCG
GAGAGTGAGGATGTCGCTGGGAAGACGTACGACATCTGGGGACCAGTGGC
CGCCATATCATCCACACTCTTCGGAGCCAATGTGTACATCCTGCTGCGGG
CGCTCAAAAACCTGCACTTCTCCGTCATCATGACGAATTTCGGTACCATC
GCTCTGGTCTACACACTGATCGTTTGCGCATCTATTGGAGCTGTGTGCTG
GCCAAGCTGCGGACGGGATCGTTGGCTGGTCGTTGTACTGGGCGTATTCA
GCTTCCTGGGCCAGATCCTGCTCACGCTATCGCTGCAGATCGAACAGGCC
GGACCAGTGGCCATTGCTCGCTGCGCCGACATCGTCTTCGCCTTCGTCTG
GCAGATGCTCTTCTTCGGAGAGACGCCCACCGCTTACTCGCTGGTGGGTG
CGGTGATGGTGATGGGATCTGTGGTTCTGACGGCCCTGAAGAAATGGGCA
GGCACCCTGCCACGCGAGTCGTCGCTGCGGAAGCGATTCAGGCTCATCCT
GCTGGAATAGAAGCTTTCTAGACCAT

BS27586.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:59:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG5281-RA 1044 CG5281-PA 1..1044 17..1060 5220 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:59:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG5281-RA 1613 CG5281-RA 270..1313 17..1060 5220 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:59:43
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11436180..11437223 17..1060 5220 100 Plus
Blast to na_te.dros performed on 2014-11-27 06:59:44 has no hits.

BS27586.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-12 10:53:27 Download gff for BS27586.complete
Subject Subject Range Query Range Percent Splice Strand
CG5281-RA 270..1313 17..1060 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:01:47 Download gff for BS27586.complete
Subject Subject Range Query Range Percent Splice Strand
CG5281-RA 270..1313 17..1060 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:00:15 Download gff for BS27586.complete
Subject Subject Range Query Range Percent Splice Strand
CG5281-RA 270..1313 17..1060 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:00:15 Download gff for BS27586.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11436180..11437223 17..1060 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:01:47 Download gff for BS27586.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7261902..7262945 17..1060 100   Plus

BS27586.pep Sequence

Translation from 16 to 1059

> BS27586.pep
MPENLELQQFQEGAPPPDPAPRWLERLQRRLGADCPYLGILLATLSSLFF
SLCSVIVKGLVDVNPMELASFRFVGVLLPALPILIYTRQPVFPEGKRVIL
LLRCFMGTTGLMLSFYAFRHMPLADASVIIFSTPVFVAIFARAFLKEPCT
LFNVLTINMTLLGVVLITRPPFVFGDTAESEDVAGKTYDIWGPVAAISST
LFGANVYILLRALKNLHFSVIMTNFGTIALVYTLIVCASIGAVCWPSCGR
DRWLVVVLGVFSFLGQILLTLSLQIEQAGPVAIARCADIVFAFVWQMLFF
GETPTAYSLVGAVMVMGSVVLTALKKWAGTLPRESSLRKRFRLILLE*

BS27586.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:12:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG5281-PA 347 CG5281-PA 1..347 1..347 1774 100 Plus