BS27589.complete Sequence
371 bp assembled on 2011-09-12
GenBank Submission: KX800361
> BS27589.complete
GAAGTTATCAGTCGACATGCGTATTTACCACCTGAATCTATTAGTGCTAA
GTGCCGGCCTACTGGTCCTGCTGGCCCAGTCGGGGACCACGGCCCCCCAG
GCGGATGAGGATGTACAGCAACTGACTCTGGCGGATGTAAATCAGGCGGA
GGAGCAGCAGGAGATGCCGGCTGTTCGCCTGGCCAGACAATTTGGATTCG
GCCGTGAAGGATTCGGCAGAGGACGCGGCGGATTCGGCGGATTTGGCGGA
AGGCGAGGCGGCGGTGGATTCCGGAGACCCGGTTTCGGTGGCGGTGGATT
CGGCGGATTCTACCCACCGCCACCGCCCTTCTTCGGCGGCCCCTTTTACG
GCTAGAAGCTTTCTAGACCAT
BS27589.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:00:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9759-RB | 339 | CG9759-PB | 1..339 | 17..355 | 1695 | 100 | Plus |
| CG9759-RC | 339 | CG9759-PC | 1..339 | 17..355 | 1695 | 100 | Plus |
| CG9759-RA | 339 | CG9759-PA | 1..339 | 17..355 | 1695 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:00:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9759-RB | 1122 | CG9759-RB | 49..387 | 17..355 | 1695 | 100 | Plus |
| CG9759-RC | 1877 | CG9759-RC | 49..387 | 17..355 | 1695 | 100 | Plus |
| CG9759-RA | 494 | CG9759-RA | 49..387 | 17..355 | 1695 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:00:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13608860..13609198 | 355..17 | 1695 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:00:33 has no hits.
BS27589.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-12 10:53:28 Download gff for
BS27589.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9759-RA | 49..387 | 17..355 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:02:11 Download gff for
BS27589.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9759-RA | 49..387 | 17..355 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:00:39 Download gff for
BS27589.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9759-RA | 49..387 | 17..355 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:00:39 Download gff for
BS27589.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13608860..13609198 | 17..355 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:02:11 Download gff for
BS27589.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9434582..9434920 | 17..355 | 100 | | Minus |
BS27589.pep Sequence
Translation from 16 to 354
> BS27589.pep
MRIYHLNLLVLSAGLLVLLAQSGTTAPQADEDVQQLTLADVNQAEEQQEM
PAVRLARQFGFGREGFGRGRGGFGGFGGRRGGGGFRRPGFGGGGFGGFYP
PPPPFFGGPFYG*
BS27589.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:13:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9759-PB | 112 | CG9759-PB | 1..112 | 1..112 | 604 | 100 | Plus |
| CG9759-PC | 112 | CG9759-PC | 1..112 | 1..112 | 604 | 100 | Plus |
| CG9759-PA | 112 | CG9759-PA | 1..112 | 1..112 | 604 | 100 | Plus |
| CG17738-PA | 110 | CG17738-PA | 8..110 | 14..112 | 141 | 43.4 | Plus |
