BS27615.complete Sequence
773 bp assembled on 2011-09-12
GenBank Submission: KX801452
> BS27615.complete
GAAGTTATCAGTCGACATGTCTCTGACTATTACTTCCAGTGTCACTCATC
CTGAGCTCAAGGATCTGAGCACCGTTCGCAATGAACAAAAGGAACTGAAC
ATTTCGCCGGTTCACGATGTGAATGTCACAAAAGCCACGGCCACTTTCGG
CATGGGTTGCTTTTGGGGCGCAGAATCCCTGTATGGAGCCACCCGTGGAG
TTTTGAGAACCACCGTGGGCTACGCCGGAGGCAGCTCGGATTTGCCAACG
TACCGTAAAATGGGCGATCATACGGAGGTGCTGGAAATCGACTATGATCC
CACGGTCATTAGCTTTAAGGAGCTGCTGGATCTGTTCTGGAACAACCATG
AGTATGGCCTGACCACGCCCATCAAGAGGCAGTACGCCTCCTTGATTCTG
TACCACGATGAGGAGCAGAAGCAGGTGGCACACGCCTCCAAATTGGAGGA
GCAAGAGCGCCGTGCACCGGAGATCATAACCACTGAGATTGCATCCAAGG
AGAACTTTTACCCAGCCGAGGCGTACCACCAGAAGTATAGGTTGCAGGGC
CACAAGGATCTCGCCTCATCGCTAAATCTCAGCCCCAAACTGCTGCAGAC
CAGCTATGTGGCCACCAAACTGAATGGCTACCTGGCCGGAGTCGGCGGCA
TCGAGCAGTTTAAGGCGGAGGCGGAGACCATGGGTCTGACGCCCACCCAG
CGGCAGTACTGCTACTACCACGTGGAGCAGAACGAGGGCCAGGGTCTCTA
CTGCTGAAAGCTTTCTAGACCAT
BS27615.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:03:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eip71CD-RG | 786 | CG7266-PG | 1..741 | 17..757 | 3690 | 99.9 | Plus |
| Eip71CD-RA | 741 | CG7266-PA | 1..741 | 17..757 | 3690 | 99.9 | Plus |
| Eip71CD-RB | 729 | CG7266-PB | 1..729 | 17..757 | 3475 | 98.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:03:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eip71CD-RG | 980 | CG7266-RG | 67..808 | 16..757 | 3695 | 99.9 | Plus |
| Eip71CD-RA | 980 | CG7266-RA | 67..808 | 16..757 | 3695 | 99.9 | Plus |
| Eip71CD-RB | 968 | CG7266-RB | 67..796 | 16..757 | 3480 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:03:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15512476..15512739 | 262..525 | 1320 | 100 | Plus |
| 3L | 28110227 | 3L | 15512796..15513030 | 523..757 | 1175 | 100 | Plus |
| 3L | 28110227 | 3L | 15512171..15512366 | 67..262 | 965 | 99.5 | Plus |
| 3L | 28110227 | 3L | 15511118..15511169 | 16..67 | 260 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:03:44 has no hits.
BS27615.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-12 10:53:31 Download gff for
BS27615.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eip71CD-RA | 67..806 | 17..756 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:03:50 Download gff for
BS27615.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eip71CD-RA | 68..807 | 17..756 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:02:00 Download gff for
BS27615.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eip71CD-RA | 68..807 | 17..756 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:02:00 Download gff for
BS27615.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15511119..15511169 | 17..67 | 100 | -> | Plus |
| 3L | 15512172..15512365 | 68..261 | 99 | -> | Plus |
| 3L | 15512476..15512736 | 262..522 | 100 | -> | Plus |
| 3L | 15512796..15513029 | 523..756 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:03:50 Download gff for
BS27615.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15504219..15504269 | 17..67 | 100 | -> | Plus |
| arm_3L | 15505272..15505465 | 68..261 | 99 | -> | Plus |
| arm_3L | 15505576..15505836 | 262..522 | 100 | -> | Plus |
| arm_3L | 15505896..15506129 | 523..756 | 100 | | Plus |
BS27615.pep Sequence
Translation from 16 to 756
> BS27615.pep
MSLTITSSVTHPELKDLSTVRNEQKELNISPVHDVNVTKATATFGMGCFW
GAESLYGATRGVLRTTVGYAGGSSDLPTYRKMGDHTEVLEIDYDPTVISF
KELLDLFWNNHEYGLTTPIKRQYASLILYHDEEQKQVAHASKLEEQERRA
PEIITTEIASKENFYPAEAYHQKYRLQGHKDLASSLNLSPKLLQTSYVAT
KLNGYLAGVGGIEQFKAEAETMGLTPTQRQYCYYHVEQNEGQGLYC*
BS27615.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:13:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eip71CD-PA | 246 | CG7266-PA | 1..246 | 1..246 | 1292 | 100 | Plus |
| Eip71CD-PG | 261 | CG7266-PG | 1..246 | 1..246 | 1292 | 100 | Plus |
| Eip71CD-PB | 242 | CG7266-PB | 1..242 | 1..246 | 1255 | 98.4 | Plus |
| Eip71CD-PF | 245 | CG7266-PF | 16..245 | 17..246 | 1213 | 100 | Plus |
| Eip71CD-PE | 239 | CG7266-PE | 11..239 | 18..246 | 1209 | 100 | Plus |
