BS27644.complete Sequence
1127 bp assembled on 2011-09-12
GenBank Submission: KX802155
> BS27644.complete
GAAGTTATCAGTCGACATGGTCAACGTCACGGAAGACGTCTTCGCCAACG
GAGCGGTGAATCCGTTCACCAAGTCAAAGGACACCATCAAGCGGTTCACC
CTGACAAATGGAGCTGGAATGTCCGTGCAATTGATCACCCGTGGAGCCAC
CATTACCAGCATAAAGACGCCTGATGCCAGCGGTCAAATAGATGACGTGA
CCCTCGGATTTGACGATTTGGCGGGCTATCAGAGCGAGAGAAATCCGTAT
TTTGGAGCAACCATTGGGCGGGTTTGCAACCGGATTGCCAATGGCAGCTT
TTATCTTGATGGAAAGCTAGTTCAGGTGTCTAAGAACCGAGACAACAAGT
TTCAGCTCCATGGCGGCTTTGTAGGCTTCGATAAGGCTCACTGGGAAGTT
GTGGAAGTGCGTGTGGATGGTGTTACCCTGTCCCACACCAATCCCGATGG
ACACGAAGGCTATCCCGGCAAGGTGACAGCCACGGCAAGCTTTACCCTCA
GCGAGGATAACTGCCTCCATGTCCAGATGAGTGCACTAGCAGATAAAACC
ACTCCCGTGAATCTCACCAACCACTCCTATTTCAACCTAGCTGGCCACAA
ATCTGGAGCCAACGGTCTCTACGAGCACACCATCGAGATAAATGCTTATG
GAATCACTGAGACGGATCAGTCTTCCATTCCCACCGGCCGTATCACACCC
GTAGAGGGAACAGGATTTGATTTACGTGTGTCCAGCAATCTGGGTGAACG
CCTCAAGGCGCTGCAGCCAGCTCGCGGCTACGATGACAACTTCTGTGTGA
CCTTCAGTCCACCACAACCATTGGCCAAGGTGGCCAGAGCCACTCATCCG
CCCAGCGGACGCTGGCTGGAGGTGGTCAGCAATCAGCCCGGAGTGCAGTT
CTACACCTCCAACTTTATGCCAGACGTGGAACGCGGTGAATCGCCCATTC
CCGGCAAGGATGGAGCTGCCTATGCCAAGCATTGTGCCTTCTGCCTGGAG
ACACAAAAGTTTCCCGACTCCGTGAACCACAGCAACTTTCCCTCGACCAT
TTTGCGACCTGGCGAAAGTTACCAGCACGAAGTCATCTACAAGTTCGGAG
TTTCTCACTGAAAGCTTTCTAGACCAT
BS27644.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:05:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10467-RA | 1095 | CG10467-PA | 1..1095 | 17..1111 | 5475 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:05:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10467-RA | 1544 | CG10467-RA | 353..1447 | 17..1111 | 5475 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:05:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 6093301..6094395 | 1111..17 | 5475 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:05:03 has no hits.
BS27644.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-12 10:53:32 Download gff for
BS27644.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10467-RA | 342..1435 | 17..1110 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:04:35 Download gff for
BS27644.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10467-RA | 353..1446 | 17..1110 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:02:33 Download gff for
BS27644.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10467-RA | 353..1446 | 17..1110 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:02:33 Download gff for
BS27644.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6093302..6094395 | 17..1110 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:04:35 Download gff for
BS27644.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 6086402..6087495 | 17..1110 | 100 | | Minus |
BS27644.pep Sequence
Translation from 16 to 1110
> BS27644.pep
MVNVTEDVFANGAVNPFTKSKDTIKRFTLTNGAGMSVQLITRGATITSIK
TPDASGQIDDVTLGFDDLAGYQSERNPYFGATIGRVCNRIANGSFYLDGK
LVQVSKNRDNKFQLHGGFVGFDKAHWEVVEVRVDGVTLSHTNPDGHEGYP
GKVTATASFTLSEDNCLHVQMSALADKTTPVNLTNHSYFNLAGHKSGANG
LYEHTIEINAYGITETDQSSIPTGRITPVEGTGFDLRVSSNLGERLKALQ
PARGYDDNFCVTFSPPQPLAKVARATHPPSGRWLEVVSNQPGVQFYTSNF
MPDVERGESPIPGKDGAAYAKHCAFCLETQKFPDSVNHSNFPSTILRPGE
SYQHEVIYKFGVSH*
BS27644.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:14:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10467-PA | 364 | CG10467-PA | 1..364 | 1..364 | 1936 | 100 | Plus |
CG32445-PA | 367 | CG32445-PA | 1..361 | 1..361 | 943 | 49.3 | Plus |
CG32444-PA | 370 | CG32444-PA | 3..358 | 2..362 | 886 | 48.1 | Plus |
CG4988-PA | 368 | CG4988-PA | 13..358 | 13..362 | 864 | 47.9 | Plus |
CG10996-PA | 392 | CG10996-PA | 1..365 | 1..362 | 837 | 46.2 | Plus |