BS27655.complete Sequence
1268 bp assembled on 2011-09-12
GenBank Submission: KX800684
> BS27655.complete
GAAGTTATCAGTCGACATGTACGAGATTCATAATTGCCTAAGGTCCGTTT
TCTTAGCCACACTCATTCCCGGAACGATCCTACTTAGTTGGCTAACTGGT
CTGGTGGGTCTGCGATGTCTGCAAGCTTGTCTGCTGATCTTCTTCCTGAT
CTTCGTGGTCCTACCGTTGATCTTTCGGTATTCCGTAACGTTCCAGCGTG
GCATCCTATTTCTGACATTTATTAAGTATCCCAAAGGACTTGATCTCACC
AAGCCGGAAAGCGTGGGTCTTTATGCCACACGAAACTTCTACATAACCGT
AAAGGATCACGATCAGGACGAGGATGGAGTGCGAGTTGGTGTGTGGCACG
TGCTGCCCAGCAATGCAGTGCGTCGTTTTAAGCGCGAACTGCGCGTGGAG
GAGGAAGTGGCCCAGGACCCGGATCAGCAGCTGGATCCTGCACCTGGCAA
CGAACGCGAGCTGAAGGAGCTATCGCCAGCCATACGATCTGAATTTCCCG
TCGTGCTGCCGGAAAACGAGCAGCTCTTCTATGAGCGATTGCTGCGGATG
CCCGGCGGTACTGTGGTCCTCTATCTTCATGGGAACACAGCCAGCCGGGG
CAGTGGTCACCGATCGGAGGTGTATAAGCTACTGCGAAAGCTCAACTATC
ATGTGTTCTCCTTCGACTACAGAGGCTATGCCGACTCCGATCCCGTACCT
CCGACGGAGGAAGGCGTTGTGCGCGATGCCATGATGGTTTTTGAATACAT
AGCCAACACCACCTCCAATCCGATTGTGGTCTGGGGCCATTCCCTTGGCA
CCGGAGTGGCCACGCATCTGTGCGCCAAGCTAGCTAGCCTACGGGAAAGG
GCTCCCAGGGGAGTGATCCTCGAAAGCCCGTTCACCAACATTCGGGACGA
GATACGCATGCATCCGTTTGCCAAACTCTATAAGAATCTGCCCTGGTTCA
ATTTTACCATCTCGCAACCAATGTACACCAATAGGCTGAGATTTGAGTCG
GATGTTCATGTCTTGGAGTTCCGGCAACCCATCATGATCATCCATGCTGA
GGACGATGTCGTGGTGCCGTTTAATCTGGGCTATCGTCTGTATAGGATCG
CATTGGATGGCAGAAGTCGAACCTCGGGACCTGTGGAGTTCCATCGCTTT
GGGGCGAGCCGAAAGTATGGACACAAATACCTCTGCCGAGCACCGGAATT
GCCGGGACTGATCCAAAAGTTTGTGGAGAACTACCGTGACGCCGTATACT
AGAAGCTTTCTAGACCAT
BS27655.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:06:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15111-RB | 1236 | CG15111-PB | 1..1236 | 17..1252 | 6180 | 100 | Plus |
| CG15111-RA | 1182 | CG15111-PA | 33..1182 | 103..1252 | 5750 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:06:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15111-RB | 1772 | CG15111-RB | 409..1644 | 17..1252 | 6180 | 100 | Plus |
| CG15111-RA | 1563 | CG15111-RA | 286..1435 | 103..1252 | 5750 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:06:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19139876..19140906 | 222..1252 | 5155 | 100 | Plus |
| 2R | 25286936 | 2R | 19139694..19139822 | 103..231 | 630 | 99.2 | Plus |
| 2R | 25286936 | 2R | 19139264..19139350 | 17..103 | 435 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:06:22 has no hits.
BS27655.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-12 10:53:33 Download gff for
BS27655.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15111-RB | 404..1639 | 17..1252 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:05:20 Download gff for
BS27655.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15111-RB | 409..1644 | 17..1252 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:03:03 Download gff for
BS27655.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15111-RB | 409..1644 | 17..1252 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:03:03 Download gff for
BS27655.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19139264..19139349 | 17..102 | 100 | -> | Plus |
| 2R | 19139694..19139812 | 103..221 | 100 | -> | Plus |
| 2R | 19139876..19140906 | 222..1252 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:05:20 Download gff for
BS27655.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15026769..15026854 | 17..102 | 100 | -> | Plus |
| arm_2R | 15027199..15027317 | 103..221 | 100 | -> | Plus |
| arm_2R | 15027381..15028411 | 222..1252 | 100 | | Plus |
BS27655.pep Sequence
Translation from 16 to 1251
> BS27655.pep
MYEIHNCLRSVFLATLIPGTILLSWLTGLVGLRCLQACLLIFFLIFVVLP
LIFRYSVTFQRGILFLTFIKYPKGLDLTKPESVGLYATRNFYITVKDHDQ
DEDGVRVGVWHVLPSNAVRRFKRELRVEEEVAQDPDQQLDPAPGNERELK
ELSPAIRSEFPVVLPENEQLFYERLLRMPGGTVVLYLHGNTASRGSGHRS
EVYKLLRKLNYHVFSFDYRGYADSDPVPPTEEGVVRDAMMVFEYIANTTS
NPIVVWGHSLGTGVATHLCAKLASLRERAPRGVILESPFTNIRDEIRMHP
FAKLYKNLPWFNFTISQPMYTNRLRFESDVHVLEFRQPIMIIHAEDDVVV
PFNLGYRLYRIALDGRSRTSGPVEFHRFGASRKYGHKYLCRAPELPGLIQ
KFVENYRDAVY*
BS27655.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:14:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15111-PB | 411 | CG15111-PB | 1..411 | 1..411 | 2167 | 100 | Plus |
| CG15111-PA | 393 | CG15111-PA | 12..393 | 30..411 | 2015 | 100 | Plus |
