Clone BS27677 Report

Search the DGRC for BS27677

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:276
Well:77
Vector:pDNR-Dual
Associated Gene/TranscriptCG14423-RA
Protein status:BS27677.pep: full length peptide match
Sequenced Size:950

Clone Sequence Records

BS27677.complete Sequence

950 bp assembled on 2011-09-12

GenBank Submission: KX806283

> BS27677.complete
GAAGTTATCAGTCGACATGAAGTTGTACGCCATCGTTATCCTTTCGGCAT
GCTGTCTTCTAGCCGCACAAGCGGCACCCGAGAAGAAGATGGCCCTGAAG
TCGCGTCAAGTCGACCAGGATGCCAAGGTGGGCCAGGCCGCTTCCAGTGC
TGGTGCATCGACCTCTGCCAAGGATCCCTCCAGTGGCAGGCTGTTTCTCA
AAAAGTTCCTAACCTTCAAGAACCTGTTTAGCAGCAACAATCAACCCGTG
ATTCCGATCATTATCACCGGCGCCGGAACCGGGACTAGCACAGGAGCCTC
ACCCACTTCGCCCACGGTGACAGTGACCTCGACAGGCACCATTCCCTCGG
CCACTGGCACCATTACCACTTCGCCCACAACACCCACCTCGACGACATCG
AGCGCACGGCAAACGATTATCAAGGGTGCCCGATATGGCAGCAACGATGA
CGACCAGGAGCAGAATCAGGAACAGGATCAGGATCAGGACCAAGAACAGG
ACCAGGAGCTGGCCCAACCCGCACAGGCCTACCCCGCCGAGTTGATGGAC
GAGCAGGCTCTGCAGGCCGCCCTGGCCGCTGGCGCCCAGGAATACGAGGT
GGTCACCACTGAGCACGAGGTCCAGGGAACTGGCGGAGCCACCGTCGAAG
GCGGCAAGGCCACCCAAAGCAATAACCATATCAGTCTGCGACGCAAAGGC
GCCCGCCGCGGCCAGGTGATCAGCGTTCGCATCCCACCCCGCTACCGCCG
CTACTTCAAGAACGGCCAGAAGGTGATGCTCAATACCGGTAGTCGTCCCG
TCTCCAAGCGTCGCGTGGTTCGCAAGCGAGTGCCTGCCAAGAAAATCAAC
AAGAACAACCGGAGGCGCAACGGCAACAAGAAGAATCGTCGCAATCGCAA
CAAGAACCGTCGCAATCGCATCACCGCCGTCTAAAAGCTTTCTAGACCAT

BS27677.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:06:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG14423-RA 918 CG14423-PA 1..918 17..934 4575 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:06:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG14423-RA 1187 CG14423-RA 128..1047 15..934 4585 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:06:39
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2945530..2946449 15..934 4585 99.9 Plus
Blast to na_te.dros performed on 2014-11-27 07:06:40 has no hits.

BS27677.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-12 10:53:34 Download gff for BS27677.complete
Subject Subject Range Query Range Percent Splice Strand
CG14423-RA 130..1045 17..932 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:05:30 Download gff for BS27677.complete
Subject Subject Range Query Range Percent Splice Strand
CG14423-RA 130..1045 17..932 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:03:11 Download gff for BS27677.complete
Subject Subject Range Query Range Percent Splice Strand
CG14423-RA 130..1045 17..932 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:03:11 Download gff for BS27677.complete
Subject Subject Range Query Range Percent Splice Strand
X 2945532..2946447 17..932 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:05:30 Download gff for BS27677.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 2839565..2840480 17..932 99   Plus

BS27677.pep Sequence

Translation from 16 to 933

> BS27677.pep
MKLYAIVILSACCLLAAQAAPEKKMALKSRQVDQDAKVGQAASSAGASTS
AKDPSSGRLFLKKFLTFKNLFSSNNQPVIPIIITGAGTGTSTGASPTSPT
VTVTSTGTIPSATGTITTSPTTPTSTTSSARQTIIKGARYGSNDDDQEQN
QEQDQDQDQEQDQELAQPAQAYPAELMDEQALQAALAAGAQEYEVVTTEH
EVQGTGGATVEGGKATQSNNHISLRRKGARRGQVISVRIPPRYRRYFKNG
QKVMLNTGSRPVSKRRVVRKRVPAKKINKNNRRRNGNKKNRRNRNKNRRN
RITAV*

BS27677.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:14:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG14423-PA 305 CG14423-PA 1..305 1..305 1532 100 Plus
CG14422-PA 294 CG14422-PA 14..291 36..301 174 25.8 Plus