BS27712.complete Sequence
407 bp assembled on 2011-09-22
GenBank Submission: KX804528
> BS27712.complete
GAAGTTATCAGTCGACATGTGCATGCAAGTTCCACGGTTTGGATGTCGAG
TTCCAGTTTCCAGTTCCCGTTGTAAGACCGGTGCAACCAGATCTTGTCGA
AAGCCCGGATCTCGCTACAGAACCTTCTGCACTCCACCACCTCGCTGTAG
TCCCAGATCCTGCTGCACATCCGAATCCTGCTGCAAATCCGGGTCCTGCT
GCGGACCATGTGGGTCATGCTCGAATGGCTGTGCCGCCTGCTTATCCTCC
TGCTGTGGGATATTCCCCGAAACCTGCTGTGGTCCGTGGTGTGAGTCCTG
TCTGGATCCTTCCTGGTTCTCATGGCTGGCTCCCGATCTCGGGCGATCCT
GCTGTTGTGCTTGCATGACCTGTTGTCGATCCAAGTGCTGAAAGCTTTCT
AGACCAT
BS27712.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:19:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42758-RA | 375 | CG42758-PA | 1..375 | 17..391 | 1875 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:19:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42758-RA | 631 | CG42758-RA | 180..555 | 16..391 | 1880 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:19:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 14567682..14568057 | 16..391 | 1880 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:19:36 has no hits.
BS27712.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-22 16:40:56 Download gff for
BS27712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42758-RA | 181..554 | 17..390 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:57:29 Download gff for
BS27712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42758-RA | 181..554 | 17..390 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:15:55 Download gff for
BS27712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42758-RA | 181..554 | 17..390 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:15:55 Download gff for
BS27712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 14567683..14568056 | 17..390 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:57:29 Download gff for
BS27712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 14560783..14561156 | 17..390 | 100 | | Plus |
BS27712.pep Sequence
Translation from 16 to 390
> BS27712.pep
MCMQVPRFGCRVPVSSSRCKTGATRSCRKPGSRYRTFCTPPPRCSPRSCC
TSESCCKSGSCCGPCGSCSNGCAACLSSCCGIFPETCCGPWCESCLDPSW
FSWLAPDLGRSCCCACMTCCRSKC*
BS27712.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:17:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42758-PA | 124 | CG42758-PA | 1..124 | 1..124 | 764 | 100 | Plus |
Pif2-PA | 118 | CG31483-PA | 2..69 | 44..124 | 160 | 42 | Plus |
Pif2-PA | 118 | CG31483-PA | 18..117 | 38..124 | 137 | 35 | Plus |