BS27719.complete Sequence
614 bp assembled on 2011-09-22
GenBank Submission: KX802905
> BS27719.complete
GAAGTTATCAGTCGACATGTTTCGTAGCTTGGTGAATATTACAAGCAAAT
ACAAAGTCCTACGCGGCATGATATCGTATGGCACCCTCTGGCCCTGCGGC
TCCCTCATCGAGCAGACCATGATCGAGAAGAAGACATTCCGGACGTACGA
CTGGATGAAGTGCCTTAGGTTCAGCTTATTCGGCTTCTTCTTTATGGGGC
CCACCATATATGTGTGGATCAGATTGGCCAGCGTTATGTGGCCGCGCACC
GACATTAAGTCATCGCTCTGCAAGGCGATCACCGAGCAGACCGCTTATGA
TCCGATGGCCATCAGCTCGTTCCTCTTCTTCATGACCTTGATGGAGGGCA
ACTCGTACGCGGAGGCCAAGCGGGAGGTCAGCGATAAATTCCTGGACGCC
TACAAGGTGGGCGTTATTTATTGGCCCTGCGTGCAGACGGTGAACTTCGC
CTTTGTTCCGGCGCGAAACCAGGTCGTGTTTACCTCCTTCTTCAGCATGT
GCTGGACCACCTTCCTGGCCTACGTCAAGTTCCTGCAGCTGCACCCTCCC
GTCGATGTGGACCACCACGCCCTGGACATCCACTTCCTGGAGATGTGAAA
GCTTTCTAGACCAT
BS27719.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:25:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2022-RB | 582 | CG2022-PB | 1..582 | 17..598 | 2910 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:25:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2022-RB | 902 | CG2022-RB | 156..737 | 17..598 | 2910 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:25:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4986665..4986888 | 598..375 | 1120 | 100 | Minus |
| 3R | 32079331 | 3R | 4988249..4988460 | 378..167 | 1060 | 100 | Minus |
| 3R | 32079331 | 3R | 4988536..4988689 | 170..17 | 770 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 08:25:57 has no hits.
BS27719.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-22 16:41:02 Download gff for
BS27719.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2022-RB | 162..736 | 23..597 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:58:52 Download gff for
BS27719.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2022-RB | 162..736 | 23..597 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:18:34 Download gff for
BS27719.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2022-RB | 162..736 | 23..597 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:18:34 Download gff for
BS27719.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4986666..4986886 | 377..597 | 100 | <- | Minus |
| 3R | 4988251..4988458 | 169..376 | 100 | <- | Minus |
| 3R | 4988538..4988683 | 23..168 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:58:52 Download gff for
BS27719.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 812388..812608 | 377..597 | 100 | <- | Minus |
| arm_3R | 813973..814180 | 169..376 | 100 | <- | Minus |
| arm_3R | 814260..814405 | 23..168 | 100 | | Minus |
BS27719.pep Sequence
Translation from 16 to 597
> BS27719.pep
MFRSLVNITSKYKVLRGMISYGTLWPCGSLIEQTMIEKKTFRTYDWMKCL
RFSLFGFFFMGPTIYVWIRLASVMWPRTDIKSSLCKAITEQTAYDPMAIS
SFLFFMTLMEGNSYAEAKREVSDKFLDAYKVGVIYWPCVQTVNFAFVPAR
NQVVFTSFFSMCWTTFLAYVKFLQLHPPVDVDHHALDIHFLEM*
BS27719.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:18:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2022-PB | 193 | CG2022-PB | 1..193 | 1..193 | 1038 | 100 | Plus |
| CG14778-PA | 186 | CG14778-PA | 15..180 | 10..176 | 453 | 46.7 | Plus |
| CG14777-PF | 196 | CG14777-PF | 23..181 | 12..171 | 434 | 47.5 | Plus |
| CG14777-PC | 196 | CG14777-PC | 23..181 | 12..171 | 434 | 47.5 | Plus |
| CG14777-PE | 196 | CG14777-PE | 23..181 | 12..171 | 434 | 47.5 | Plus |
