Clone BS27726 Report

Search the DGRC for BS27726

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:277
Well:26
Vector:pDNR-Dual
Associated Gene/TranscriptCG32259-RC
Protein status:BS27726.pep: full length peptide match
Sequenced Size:524

Clone Sequence Records

BS27726.complete Sequence

524 bp assembled on 2011-09-22

GenBank Submission: KX801339

> BS27726.complete
GAAGTTATCAGTCGACATGAATAAGATGAACCCAAATCGTAGCAATAAGG
ATTCGGACACCACTGAGGATTCCAACGCGAAGAAGAGTTTGCAAATGGAT
TCCGATTCATCAGACGTGTCGAAAGATTACTGTGATGGTTCAGATGAGAA
CGAGGAGTCCGACCCATCATCAGGTTCCTCACAGGATTCGATAACTGAAA
AATTAGCGAAAGCCATATTAGAGGCCAATCTAAGCGAGGACTCTGACTCT
TCATCGGGTTCTTCAGAGCACTCTCCAGCTCAAGAAATACCAATACCAGA
AGCCTTGTTGGAAGTGGATCCAAATGATCAGCAGTCGGTTGTCAATGCAG
TCGGACTTTTGGTTAACATGATTAACTCCAAACTGGATGCTATCATGTCG
AAAGTCGTCCCGCAATCACCACTTGATCTTGTCGACCTCGTCCGCCAGAA
AAAACTTTGGAAGATGCGTCAACGCGATAAAGCCCAGTTGAAGAAAAGCT
CCGAATAGAAGCTTTCTAGACCAT

BS27726.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:28:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG32259-RD 492 CG32259-PD 1..492 17..508 2460 100 Plus
CG32259-RC 492 CG32259-PC 1..492 17..508 2460 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:28:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG32259-RD 779 CG32259-RD 189..682 17..510 2470 100 Plus
CG32259-RC 731 CG32259-RC 141..634 17..510 2470 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:28:38
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4069702..4070184 28..510 2415 100 Plus
Blast to na_te.dros performed on 2014-11-27 08:28:39 has no hits.

BS27726.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-22 16:41:04 Download gff for BS27726.complete
Subject Subject Range Query Range Percent Splice Strand
CG32259-RD 189..680 17..508 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:59:19 Download gff for BS27726.complete
Subject Subject Range Query Range Percent Splice Strand
CG32259-RC 141..632 17..508 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:19:47 Download gff for BS27726.complete
Subject Subject Range Query Range Percent Splice Strand
CG32259-RC 141..632 17..508 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:19:47 Download gff for BS27726.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4069702..4070182 28..508 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:59:19 Download gff for BS27726.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4069702..4070182 28..508 100   Plus

BS27726.pep Sequence

Translation from 16 to 507

> BS27726.pep
MNKMNPNRSNKDSDTTEDSNAKKSLQMDSDSSDVSKDYCDGSDENEESDP
SSGSSQDSITEKLAKAILEANLSEDSDSSSGSSEHSPAQEIPIPEALLEV
DPNDQQSVVNAVGLLVNMINSKLDAIMSKVVPQSPLDLVDLVRQKKLWKM
RQRDKAQLKKSSE*

BS27726.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:18:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG32259-PD 163 CG32259-PD 1..163 1..163 812 100 Plus
CG32259-PC 163 CG32259-PC 1..163 1..163 812 100 Plus