BS27728.complete Sequence
413 bp assembled on 2011-09-22
GenBank Submission: KX805711
> BS27728.complete
GAAGTTATCAGTCGACATGATTAGATCCTGTCGAGCTCTGATCTCCCAGT
GCGGATTACACCTAAGACGATGTTCTCTTGCAAAGGCAGCAAGTAATTTG
AAAAAAGATGATGTCGAAGAAATGGAAACACCAGCGAATAGACAGAGGGT
TGAGCTGCCACCGAATCCCGAGGAAAAACTAAGTAAGCGCTATCTTGCGT
TCCGGGAAAAGCTGCGATCGGAGGCGCCGCTAGAACCACTGCCCGAGTGT
GCACCACATCCGGCCCACGAAAAGGAGCCACTTAAACCGTGGCCCAATAA
TACCAATCCGTATACCGGGGAAATCGGTGGACAAGCGGGACCAGAACCCA
CGCGCTATGGCGACTGGGAGCGCAAGGGACGAGTCACGGATTTCTGAAAG
CTTTCTAGACCAT
BS27728.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:30:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15283-RB | 381 | CG15283-PB | 1..381 | 17..397 | 1905 | 100 | Plus |
Sirup-RC | 357 | CG7224-PC | 216..355 | 256..395 | 340 | 82.9 | Plus |
Sirup-RA | 357 | CG7224-PA | 216..355 | 256..395 | 340 | 82.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:30:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15283-RB | 641 | CG15283-RB | 63..443 | 17..397 | 1905 | 100 | Plus |
Sirup-RC | 727 | CG7224-RC | 460..599 | 256..395 | 340 | 82.9 | Plus |
Sirup-RA | 650 | CG7224-RA | 383..522 | 256..395 | 340 | 82.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:30:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 14450480..14450860 | 397..17 | 1905 | 100 | Minus |
2L | 23513712 | 2L | 7999409..7999548 | 256..395 | 340 | 82.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:30:08 has no hits.
BS27728.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-22 16:41:05 Download gff for
BS27728.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15283-RB | 63..442 | 17..396 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:59:32 Download gff for
BS27728.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15283-RB | 63..442 | 17..396 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:20:25 Download gff for
BS27728.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15283-RB | 63..442 | 17..396 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:20:25 Download gff for
BS27728.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 14450481..14450860 | 17..396 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:59:32 Download gff for
BS27728.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 14450481..14450860 | 17..396 | 100 | | Minus |
BS27728.pep Sequence
Translation from 16 to 396
> BS27728.pep
MIRSCRALISQCGLHLRRCSLAKAASNLKKDDVEEMETPANRQRVELPPN
PEEKLSKRYLAFREKLRSEAPLEPLPECAPHPAHEKEPLKPWPNNTNPYT
GEIGGQAGPEPTRYGDWERKGRVTDF*
BS27728.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:18:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15283-PB | 126 | CG15283-PB | 1..126 | 1..126 | 688 | 100 | Plus |
Sirup-PC | 118 | CG7224-PC | 48..118 | 56..126 | 289 | 70.4 | Plus |
Sirup-PA | 118 | CG7224-PA | 48..118 | 56..126 | 289 | 70.4 | Plus |