BS27730.complete Sequence
491 bp assembled on 2011-09-22
GenBank Submission: KX800193
> BS27730.complete
GAAGTTATCAGTCGACATGTTTCCTGTTGCACGAATCTTAGGCTCGGCAT
CGTGCAACAGGCTATTTCAACCTCAGGTGCTATGTCAAGAAAGAGTTTGT
TGGCCTTCCAATGAGTTGCACAGAAATTTACCAAGGCATAGAAACTTTTA
CCACGGTAGAAACATTTTCCACCCAAGGTCGAATAATAATTTAAACGAAT
TTCCTGCTAAACGTCAATTCACTGACAAATTTTCCGAGAAGGGCAGAGGC
GAGGAACTTAACTATGTTCTCAAACTTGCCTCAGAGCAATTTATGAAGAT
AAAAAAGAACAGGGTTAAAGAAATCGCCAATGATATCGTCAAATTGAAAG
AGGAGATCAAGATTTTGGAATCCAAAACTAGCCACAAATCAAGGAAACAC
AAGGAGAATCTGCTAAAGGAATTGAAAGCTCTGAAGGATTTGTTGGAGCA
ATTCAAAAAGAGTCTCGAAAAATGAAAGCTTTCTAGACCAT
BS27730.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:32:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42559-RC | 459 | CG42559-PC | 1..459 | 17..475 | 2295 | 100 | Plus |
CG42559-RB | 459 | CG42559-PB | 1..459 | 17..475 | 2295 | 100 | Plus |
CG42559-RA | 459 | CG42559-PA | 1..459 | 17..475 | 2295 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:32:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42560-RA | 880 | CG42560-RA | 100..559 | 16..475 | 2300 | 100 | Plus |
CG42559-RC | 942 | CG42559-RC | 100..559 | 16..475 | 2300 | 100 | Plus |
CG42559-RB | 939 | CG42559-RB | 100..559 | 16..475 | 2300 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:32:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23600058..23600255 | 475..278 | 990 | 100 | Minus |
2R | 25286936 | 2R | 23600439..23600550 | 210..99 | 560 | 100 | Minus |
2R | 25286936 | 2R | 23600605..23600688 | 99..16 | 420 | 100 | Minus |
2R | 25286936 | 2R | 23600313..23600380 | 278..211 | 340 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 08:32:02 has no hits.
BS27730.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-22 16:41:06 Download gff for
BS27730.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42559-RA | 107..551 | 23..467 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:59:51 Download gff for
BS27730.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42559-RB | 107..551 | 23..467 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:21:13 Download gff for
BS27730.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42559-RB | 107..551 | 23..467 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:21:13 Download gff for
BS27730.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23600605..23600681 | 23..99 | 100 | | Minus |
2R | 23600314..23600380 | 211..277 | 100 | <- | Minus |
2R | 23600439..23600549 | 100..210 | 100 | <- | Minus |
2R | 23600066..23600255 | 278..467 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:59:51 Download gff for
BS27730.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19487589..19487778 | 278..467 | 100 | <- | Minus |
arm_2R | 19487837..19487903 | 211..277 | 100 | <- | Minus |
arm_2R | 19487962..19488072 | 100..210 | 100 | <- | Minus |
arm_2R | 19488128..19488204 | 23..99 | 100 | | Minus |
BS27730.pep Sequence
Translation from 16 to 474
> BS27730.pep
MFPVARILGSASCNRLFQPQVLCQERVCWPSNELHRNLPRHRNFYHGRNI
FHPRSNNNLNEFPAKRQFTDKFSEKGRGEELNYVLKLASEQFMKIKKNRV
KEIANDIVKLKEEIKILESKTSHKSRKHKENLLKELKALKDLLEQFKKSL
EK*
BS27730.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:18:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42559-PC | 152 | CG42559-PC | 1..152 | 1..152 | 794 | 100 | Plus |
CG42559-PB | 152 | CG42559-PB | 1..152 | 1..152 | 794 | 100 | Plus |
CG42559-PA | 152 | CG42559-PA | 1..152 | 1..152 | 794 | 100 | Plus |