BS27753.complete Sequence
1859 bp assembled on 2012-04-25
GenBank Submission: KX804084
> BS27753.complete
GAAGTTATCAGTCGACATGGGTCAAAACCTGAGCCTGCGACGGCCGCGCA
TCTCATTGACCTGGGTGCTCCGAGAGCAGCAGCAGACGCAGCAGGCTCCT
CCGTCGCAAACACCCCCATCCCCGCAGAAGGAGGCAGCGAAGGAATCGGA
CAGCCAGGTGCTGGATCGCAAGGAGAACGAAGTCTTCCCGCCCAGAACAG
AGCCCGTGCCCACCCAGCTGGATGTCACCAAGAAGCGGTACCGTGTTAAG
CAGCTACCAAGTGGTGGTGAGCCGCTCAATGGCTATGCCACCACGCCCAC
CGCCCACCAGGCTCCTCCCAACGGTCACCTGGCCAACCAGAAGTTCTTCA
GCAACCAAAACCTGCTGGACGTGTCACGGAGCGGTCCCAGCAGTGCTCCA
GTGGCCGCCGCCTCCACCAAAGAGCTGCTCTTCGTGTGCACACCCCAGCG
GGCGCCCAGGACCGATAGTCATAGCGAAGCCCTGCTTCTGGCCAGAAAGC
GAAACGAGATCCGTAAGAAGCTGGCCTCCCGCCTGCAGCAGGCAAGATCC
AGTGCCTCGCAGGCGGGTGAGGCCAGGGGATCGGTCACGGGAGCGGAGTC
TGTAAAGTGCACCTCCTACTCGGAGCCCAGTTTGGTGGCTGCCTCGGAGG
GCGGCGGAGTGGGGGGCTCGGGCGGAGGAGCAGCTGCCCCCCAGCAGCAG
CGGAGACATAGGCATCGCAAGCGTCGGGATCGCAATCGTGTGCAGAGATT
TGGCTATGAGATCCACAACGTGGACGAGTTTCTCTCCCGCTGCTCTCTGG
CCACTCCCGGCAATATTCCCGTGGTTCTTTCCACGGCCAGCACCCTATAC
CAAACGAGACCAGGTGGCTACCAACTGGAGATCCCTCTGCCCCTGGGCAT
GGTGGTGAATGCGGTTTTCAAGAACCAGAACTGGCTGTATGTGCAAACGC
CCCACGCGGAGGAGGGCTATGTGGGCTATGCCTGCTGCCTGCCCCTTGGG
ATTCTGCCCCAGCAGGCAAGAGCGGGCTCCAGGAACACCCCCTGCTGGGA
GTCCAATGCGGATGTCTTCCCCCGCCCATGTGGCAACATGACGGACTCGG
AGAAGGAGATCCGCCTGCGTGGTGGCACCCGATCCGATGGCGCCCGCACT
CCACGCAGCTCAAAGCCCACTGAAGATGTCCTCAAGATCGGATCCACCAC
CATCAACAACAACAACAACCATAGCAATAATAATAACCAAGCGAAGTGCG
GGAGCACAACCAGCTCCTTGTACGGAGAACAACAGGTGGACAAGCTGTAT
CTGAGGGCCGCATCCAAGCCGCGCCTAGTGGAGAAGGCGTACGCCCAGTT
GCGCTCCACTCGCCAGGTGACTGCATCTGGTTCAGCTTCGGCCAAGAGCG
GCGCTTCTCAGGATGAGTATGTGACCCTGCAGCCAAAGCCCGCCAAGAAG
CAGCCGAGTGCCCAAGCCCATTTGCACCAGTCACAGCCAGCGGCCAGGCG
CCTCTCCAACGTGTCCTACATCACCAACGGCCACAATGGCCAGCATCTGC
ATCCGAAGCTCGTGCCCCTGCCACCCTACGAGCACAAGCCGGCCAAGAAC
CAGGCGGAGGCAGACGCCACCCTAAAGGCGCTGCGGCGCCAGCAGGAGGT
GGGCCAGCGACAAACTCTAGTCGCCATCAACACGGACTACATCACGGAGA
GCATCGCGGTGCACAAGGGTGAGATTGTCACGCTGTGCGAGTGCCGCGAG
TCCAAGGATCAGCGCCAGTGGTTCTACGTGCGGACGAGGGACGGACGCGA
AGGCTTCATTCCGGCCGAGGTGGCCGGCCATGGCTACCTGTAGAAGCTTT
CTAGACCAT
BS27753.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:59:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7991-RC | 1827 | CG7991-PC | 1..1827 | 17..1843 | 9135 | 100 | Plus |
| CG7991-RB | 2667 | CG7991-PB | 841..2667 | 17..1843 | 9135 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:59:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7991-RC | 4073 | CG7991-RC | 1600..3427 | 17..1844 | 9140 | 100 | Plus |
| CG7991-RB | 3727 | CG7991-RB | 1254..3081 | 17..1844 | 9140 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:59:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1713068..1714895 | 17..1844 | 9140 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 11:59:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2370..2473 | 1183..1284 | 145 | 62.5 | Plus |
BS27753.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 15:17:01 Download gff for
BS27753.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7991-RC | 1600..3426 | 17..1843 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:35 Download gff for
BS27753.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7991-RB | 1254..3080 | 17..1843 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:55:01 Download gff for
BS27753.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7991-RB | 1254..3080 | 17..1843 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:55:01 Download gff for
BS27753.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1713068..1714894 | 17..1843 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:35 Download gff for
BS27753.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1713068..1714894 | 17..1843 | 100 | | Plus |
BS27753.pep Sequence
Translation from 16 to 1842
> BS27753.pep
MGQNLSLRRPRISLTWVLREQQQTQQAPPSQTPPSPQKEAAKESDSQVLD
RKENEVFPPRTEPVPTQLDVTKKRYRVKQLPSGGEPLNGYATTPTAHQAP
PNGHLANQKFFSNQNLLDVSRSGPSSAPVAAASTKELLFVCTPQRAPRTD
SHSEALLLARKRNEIRKKLASRLQQARSSASQAGEARGSVTGAESVKCTS
YSEPSLVAASEGGGVGGSGGGAAAPQQQRRHRHRKRRDRNRVQRFGYEIH
NVDEFLSRCSLATPGNIPVVLSTASTLYQTRPGGYQLEIPLPLGMVVNAV
FKNQNWLYVQTPHAEEGYVGYACCLPLGILPQQARAGSRNTPCWESNADV
FPRPCGNMTDSEKEIRLRGGTRSDGARTPRSSKPTEDVLKIGSTTINNNN
NHSNNNNQAKCGSTTSSLYGEQQVDKLYLRAASKPRLVEKAYAQLRSTRQ
VTASGSASAKSGASQDEYVTLQPKPAKKQPSAQAHLHQSQPAARRLSNVS
YITNGHNGQHLHPKLVPLPPYEHKPAKNQAEADATLKALRRQQEVGQRQT
LVAINTDYITESIAVHKGEIVTLCECRESKDQRQWFYVRTRDGREGFIPA
EVAGHGYL*
BS27753.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:23:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7991-PC | 608 | CG7991-PC | 1..608 | 1..608 | 3169 | 100 | Plus |
| CG7991-PB | 888 | CG7991-PB | 281..888 | 1..608 | 3169 | 100 | Plus |
