BS27755.complete Sequence
3746 bp assembled on 2011-10-14
GenBank Submission: KX805339
> BS27755.complete
GAAGTTATCAGTCGACATGTTTGCTCACCCCTGTCCTGCTCCAGCTGGAA
ACTACCACTCAGGACTGCTGCATCCACTGCTCCTGCTCCTCTTTCTGCTC
GCTTTTAGCAACTTCCGGCCGACTCATGGAGAGGTCTTCACGCTGGGTTA
CCTCACGGCCTCGCAACGGCGGCCGGGAAACCTGGACTACAACCGACCCG
GTCTCACCATATCCGGCGCCATCTCGCTGGCGGTGGAGGAGGTGAATGCC
GGACGACTCAGGGATCGGGGTCATTCCCTTCAGTTCGTCGTGGCCGAAAC
TTACGGTGAGGAGGTGGTCAGCATCCGTCAAACGGCGGCACTGTGGACGC
AGCAGGTGGCCGCCTATATTGGCCCCCAGGAAACTTGCGTACACGAAGGT
CGCATGGCGGCCGCCTTTAACCTGCCCATGATATCTTATTACTGCACCCA
TCGGGATCCCTCGAACAAGGCTGATTTTCCCACCTTTGCCAGGACACGTC
CACCGGACACGCAGATCTCCAAGTCCGTAGTGGCCCTTTTGCTGGCGTTT
AACTGGACGCAAGTCAGCTTCCTTTACTTGGACGACGCCAGTGGTCAGTA
TCAGCCCGTGGCGGAGACCATCCTAAGCACACTGACTGATGCCGGAGTCA
GTATCCGGGACATTCGCACTTGGAATACCATCTACCATCACGGATTTATG
GACAATCCATTTGAGGCGCTGGTGGAGCAGACCTATGCCAACACGAGGAT
CTATCTCATTTTGGGTCACTACTATGAGCATGTCGGACTGATGGTTAGTC
TCCAAAGAAGAGGAATTCTGTCAAAGGGCGACTATTTCGTAGTCGGCATA
GACATTGAACAGTATGATCCGGCCAAGCCAGAAAAGTATTTGCGAGGACT
CCTGCTGGAGGATGTGGAGCCATTGGCCGTGCAGGCCTTTCAGTCATATC
TGGGCATTGTGCCCACGGCGTCCGTCTCCTTTGCCACTTTTGCCAATGAG
GTCAACAAATACATGGAGCGACCGCCATTCAATTTCCCCAATCCGCTGGG
TCCCTTCGGCGGAGTAAAGCAGATAAGCGCCGAGGCTGCCTATCTCTACG
ATGCTGTGCATCTTTACGCGAAGGCCTTGATGGAAGTCCTGGATTCGGGC
GGAAGACCCAGGAACGGCAGCGCCATTGTGGCGGCCATCAAGGGTTCGCG
ATATCGCAGCGCCATGGGCTATCACGTCTACATCGATGAGAATGGCGATG
CAGCTGGAAATTATACAGTATTAGCAAGAGGATCCGTGCGAAATGGTCGC
AATCAGACTGTCCTGGGCCTGCGACCCGTGGGAACCTTCATTCACCGGAA
CAGCAGCTTGAGCAGCATCAGCAAGGCGTTGCCCCACCAGAATCTCAAAC
TGTTCAGCCCCATCGACTGGGTGGGTGGCACGCGACCAGCAGCTGCTCCT
CGGTGCGGATTTGGCGGCGAGAAGTGCGTCAATTACACTGGCGAAATTTC
AGCGGCCATTGCCGGAGGTGCCCTATTGCTGCTCAGCTTGGTCTCGCTGG
TCCTCTATCGCAACTGGCGGTACGAACAGGAGCTGGACAGTCTGCTCTGG
AAGATTGACTTTCGTGAAGTGCAGATCCATGAGAACGAACGTGAACAGCA
AAGTCAGAAGCAGACGCGCTCCACCCATCCACTGATACGCACCAGCCAGG
TGAGCCTGAGCTCCAATCCGGACGCCGACTTCCGCTACACGACAATCTTT
ACGCCCATCGGACTGTACAAAGGTCAGCTGTATGCCATCAAAAAGGTGCG
AAAGAAGAGCGTGGACATCACCCGCGAAATGAAAAAGGAGCTAAAGCTGC
TGCGAGATGCCCGGCACGACAATATATGCGCCTTCATAGGCGCCTGCACG
GATCCGCCAAACATCTGCATCATCAGCGAGTACTGCACCCGCGGCAGCCT
TAAGGACATTCTGGAGAACGAGGACGTCAAGCTGGACAACATGTTCATTG
CCTCCATGGTGGCAGACATTATACGCGGCGTCATCTATTTGCACGACTCG
CCCATTCGCTTCCATGGCGCTCTATGCACCTCCAACTGCCTGGTGGACTC
CCGATGGGTGGTCAAGCTAACGGACTTTGGCCTCTTTGCTTTCAAACAAG
GAATTGAAGACAGCTCCACAGATATGCAGCATATGTCGGCCAAGTGTCTG
AAGCTTCTTTATCGAGCTCCAGAGCTGCTGCGACAGGGTCCATCCTCGCT
GGTGATGGGCACACAACGAGGGGATGCCTATTCCTTTGGCATTCTCCTGT
ACGAGATGCATGTCCGTAGAGGACCCTTTGGTGAGACGGGTCTGACACCC
ATGCAGTGCCTGCAAAAGGTTCTTCAGCCGCAGGATTACCTTAATCCATA
CAGACCATCTTTGCAACCGCTGGAAACGGCCTTTGACTGCGTCAGCGAGT
GCCTGAGAGAATGCTGGGCGGAGAGGCCAGAGGATCGTCCAGATTTCAAA
ACCATCCGCACCAAACTAAGACCTCTGCGAAAGGGGATGAGACCCAACAT
TTTCGACAATATGATGGCAATGATGGAGAAGTATGCCAATAATTTGGAGG
CTCTCGTTGACGATCGCACGGATCAATTGCAGGAAGAAAAGAAGAAGACC
GATGCACTGCTGCACGAAATGTTGCCGCGCTGCGTAGCTGACCAGTTGAA
GAAGGGTCACAAGGTGGACCCCGAACACTACGAACAGGTTAGCATCTACT
TCAGCGACATCGTGGGCTTCACAGCGATGTCTGCCGAATGCACCCCGTTG
CAGGTGGTAGATTTCCTCAACGATCTGTACACCTGCTTCGATTCAATTAT
TGGCCACTATGATGTCTACAAAGTTGAAACTATCGGTGATGCTTACATGG
TGGTCTCTGGACTTCCGCTGCGCAATGGTGACTTGCATGCTGCGGAAATA
GCCACCATGTCGTTGCATCTACTCAGTGCCGTATCAGAGTTTAAGATCCG
TCACCGGCCCACAAACCGCTTGCTCCTGCGGATTGGCATACACTCGGGTC
CCGTTTGTGCGGGTGTTGTGGGTCTGAAGATGCCACGTTACTGTCTTTTC
GGGGATACTGTAAATACAGCTTCCCGCATGGAGTCCAGTGGTGTTCCCCT
GAAGATTCATTGCAGCTGGCAGTGCAGGCAACTGCTAGATAGGCTGGGTG
GCTATCACTTTGCGGAGCGTGGCGTCATCTCAATGAAGGGAAAAGGTGAT
CAGCGCACTTACTGGCTGCTGGGCGAAGATGAGGAGGCACGCACTCGTCG
CACCTATGAGCGATCTCAGAGACGCGGATCCAGGGCACTCAACAAGTTCA
TCCAGGGCACCATAAAGCAGGCCCAGGAACAGGCCAACGAGTACGGGATA
CGCTCCTCCCTCAAGCAAAAGAATCTGCCCAGAAACTCGCTGACGCGCTC
TTCCAGTCTGGAGTCACCCAAGAAGCTACGATTTGCTGCTGGTAGCCTCC
TGGAGCATCATCGCTATCACAGTGACGAGGCACTGCTGGAGGTGGACTCC
TACACGGGACTGCGCCGTTCCTCGGGAGGATCCACACAGTCGCGCTATGA
GGAGACGACCCTATCGCTGACCCTGTCCTGCCAAAGTATTGAAATCGTGG
GTGGTCAACATAATAAAAGGCGACCCTCCTCTTATCCCACTGCCAATACG
CCACTGCTGATGAACCACGTGGAGGTTTAAAAGCTTTCTAGACCAT
BS27755.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:23:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10738-RE | 3714 | CG10738-PE | 1..3714 | 17..3730 | 18570 | 100 | Plus |
| CG10738-RF | 3708 | CG10738-PF | 1..3708 | 17..3730 | 18445 | 99.8 | Plus |
| CG10738-RD | 3753 | CG10738-PD | 1693..3753 | 1670..3730 | 10305 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:23:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10738-RE | 5082 | CG10738-RE | 1096..4809 | 17..3730 | 18570 | 100 | Plus |
| CG10738-RF | 5076 | CG10738-RF | 1096..4803 | 17..3730 | 18445 | 99.8 | Plus |
| CG10738-RD | 5121 | CG10738-RD | 2788..4848 | 1670..3730 | 10305 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:23:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13463679..13464999 | 2202..3522 | 6605 | 100 | Plus |
| 3L | 28110227 | 3L | 13460263..13460685 | 17..439 | 2115 | 100 | Plus |
| 3L | 28110227 | 3L | 13460742..13461051 | 440..749 | 1550 | 100 | Plus |
| 3L | 28110227 | 3L | 13461111..13461363 | 750..1002 | 1265 | 100 | Plus |
| 3L | 28110227 | 3L | 13465057..13465266 | 3521..3730 | 1050 | 100 | Plus |
| 3L | 28110227 | 3L | 13462358..13462545 | 1482..1669 | 940 | 100 | Plus |
| 3L | 28110227 | 3L | 13462904..13463083 | 1670..1849 | 900 | 100 | Plus |
| 3L | 28110227 | 3L | 13463445..13463619 | 2027..2201 | 875 | 100 | Plus |
| 3L | 28110227 | 3L | 13461852..13462018 | 1218..1384 | 835 | 100 | Plus |
| 3L | 28110227 | 3L | 13461636..13461784 | 1070..1218 | 745 | 100 | Plus |
| 3L | 28110227 | 3L | 13463141..13463247 | 1849..1955 | 535 | 100 | Plus |
| 3L | 28110227 | 3L | 13462200..13462293 | 1388..1481 | 470 | 100 | Plus |
| 3L | 28110227 | 3L | 13463307..13463381 | 1953..2027 | 375 | 100 | Plus |
| 3L | 28110227 | 3L | 13461491..13461564 | 999..1072 | 370 | 100 | Plus |
| 3R | 32079331 | 3R | 15859556..15859734 | 2913..2735 | 340 | 79.3 | Minus |
| 3L | 28110227 | 3L | 19722260..19722428 | 2904..2736 | 215 | 75.1 | Minus |
| 3L | 28110227 | 3L | 19753676..19753844 | 2904..2736 | 215 | 75.1 | Minus |
| 3R | 32079331 | 3R | 15859326..15859401 | 3143..3068 | 200 | 84.2 | Minus |
| 2R | 25286936 | 2R | 20987260..20987355 | 2940..2845 | 195 | 80.2 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:23:18 has no hits.
BS27755.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-10-14 10:43:31 Download gff for
BS27755.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10738-RE | 1102..4807 | 23..3728 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:59:43 Download gff for
BS27755.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10738-RE | 1102..4807 | 23..3728 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:17:51 Download gff for
BS27755.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10738-RE | 1102..4807 | 23..3728 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:17:51 Download gff for
BS27755.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13463445..13463619 | 2027..2201 | 100 | -> | Plus |
| 3L | 13462904..13463083 | 1670..1849 | 100 | -> | Plus |
| 3L | 13463142..13463246 | 1850..1954 | 100 | -> | Plus |
| 3L | 13460269..13460685 | 23..439 | 100 | -> | Plus |
| 3L | 13465059..13465264 | 3523..3728 | 100 | | Plus |
| 3L | 13460742..13461051 | 440..749 | 100 | -> | Plus |
| 3L | 13461111..13461361 | 750..1000 | 100 | -> | Plus |
| 3L | 13461493..13461564 | 1001..1072 | 100 | -> | Plus |
| 3L | 13461639..13461784 | 1073..1218 | 100 | -> | Plus |
| 3L | 13461853..13462022 | 1219..1390 | 97 | -> | Plus |
| 3L | 13462203..13462293 | 1391..1481 | 100 | -> | Plus |
| 3L | 13462358..13462545 | 1482..1669 | 100 | -> | Plus |
| 3L | 13463309..13463380 | 1955..2026 | 100 | -> | Plus |
| 3L | 13463679..13464999 | 2202..3522 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:59:43 Download gff for
BS27755.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13453369..13453785 | 23..439 | 100 | -> | Plus |
| arm_3L | 13453842..13454151 | 440..749 | 100 | -> | Plus |
| arm_3L | 13454211..13454461 | 750..1000 | 100 | -> | Plus |
| arm_3L | 13454593..13454664 | 1001..1072 | 100 | -> | Plus |
| arm_3L | 13454739..13454884 | 1073..1218 | 100 | -> | Plus |
| arm_3L | 13454953..13455122 | 1219..1390 | 97 | -> | Plus |
| arm_3L | 13455303..13455393 | 1391..1481 | 100 | -> | Plus |
| arm_3L | 13455458..13455645 | 1482..1669 | 100 | -> | Plus |
| arm_3L | 13456004..13456183 | 1670..1849 | 100 | -> | Plus |
| arm_3L | 13456242..13456346 | 1850..1954 | 100 | -> | Plus |
| arm_3L | 13456409..13456480 | 1955..2026 | 100 | -> | Plus |
| arm_3L | 13456545..13456719 | 2027..2201 | 100 | -> | Plus |
| arm_3L | 13456779..13458099 | 2202..3522 | 100 | -> | Plus |
| arm_3L | 13458159..13458364 | 3523..3728 | 100 | | Plus |
BS27755.pep Sequence
Translation from 16 to 3729
> BS27755.pep
MFAHPCPAPAGNYHSGLLHPLLLLLFLLAFSNFRPTHGEVFTLGYLTASQ
RRPGNLDYNRPGLTISGAISLAVEEVNAGRLRDRGHSLQFVVAETYGEEV
VSIRQTAALWTQQVAAYIGPQETCVHEGRMAAAFNLPMISYYCTHRDPSN
KADFPTFARTRPPDTQISKSVVALLLAFNWTQVSFLYLDDASGQYQPVAE
TILSTLTDAGVSIRDIRTWNTIYHHGFMDNPFEALVEQTYANTRIYLILG
HYYEHVGLMVSLQRRGILSKGDYFVVGIDIEQYDPAKPEKYLRGLLLEDV
EPLAVQAFQSYLGIVPTASVSFATFANEVNKYMERPPFNFPNPLGPFGGV
KQISAEAAYLYDAVHLYAKALMEVLDSGGRPRNGSAIVAAIKGSRYRSAM
GYHVYIDENGDAAGNYTVLARGSVRNGRNQTVLGLRPVGTFIHRNSSLSS
ISKALPHQNLKLFSPIDWVGGTRPAAAPRCGFGGEKCVNYTGEISAAIAG
GALLLLSLVSLVLYRNWRYEQELDSLLWKIDFREVQIHENEREQQSQKQT
RSTHPLIRTSQVSLSSNPDADFRYTTIFTPIGLYKGQLYAIKKVRKKSVD
ITREMKKELKLLRDARHDNICAFIGACTDPPNICIISEYCTRGSLKDILE
NEDVKLDNMFIASMVADIIRGVIYLHDSPIRFHGALCTSNCLVDSRWVVK
LTDFGLFAFKQGIEDSSTDMQHMSAKCLKLLYRAPELLRQGPSSLVMGTQ
RGDAYSFGILLYEMHVRRGPFGETGLTPMQCLQKVLQPQDYLNPYRPSLQ
PLETAFDCVSECLRECWAERPEDRPDFKTIRTKLRPLRKGMRPNIFDNMM
AMMEKYANNLEALVDDRTDQLQEEKKKTDALLHEMLPRCVADQLKKGHKV
DPEHYEQVSIYFSDIVGFTAMSAECTPLQVVDFLNDLYTCFDSIIGHYDV
YKVETIGDAYMVVSGLPLRNGDLHAAEIATMSLHLLSAVSEFKIRHRPTN
RLLLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESSGVPLKIHCS
WQCRQLLDRLGGYHFAERGVISMKGKGDQRTYWLLGEDEEARTRRTYERS
QRRGSRALNKFIQGTIKQAQEQANEYGIRSSLKQKNLPRNSLTRSSSLES
PKKLRFAAGSLLEHHRYHSDEALLEVDSYTGLRRSSGGSTQSRYEETTLS
LTLSCQSIEIVGGQHNKRRPSSYPTANTPLLMNHVEV*
BS27755.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:28:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10738-PE | 1237 | CG10738-PE | 1..1237 | 1..1237 | 6474 | 100 | Plus |
| CG10738-PD | 1250 | CG10738-PD | 1..1250 | 1..1237 | 6450 | 99 | Plus |
| CG10738-PF | 1235 | CG10738-PF | 1..1235 | 1..1237 | 6448 | 99.8 | Plus |
| CG10738-PC | 1248 | CG10738-PC | 1..1248 | 1..1237 | 6424 | 98.8 | Plus |
| Gyc32E-PB | 1191 | CG33114-PB | 15..1076 | 21..1084 | 1986 | 41.8 | Plus |
