BS27767.complete Sequence
779 bp assembled on 2011-09-27
GenBank Submission: KX803661
> BS27767.complete
GAAGTTATCAGTCGACATGTCCAGCGACGCCAATACGGCCGTGCTGCGCA
ACTGCATCCGCTTGCCGCTGGCGGAGGATGAGCTACTGGAGGTGACGGCC
AAGGCCAAGGATTATGCCATTATGCACGGCGCCGCCATGCGATCGAAGAC
GGCCTTCAGTCCGGACTCGTTGAATTTCGCCCCCTTCGTGCTGGTGCCTT
CCTCGTTTCCGCGCAAGGAGTTCGAAAAGGCGGTGGCCCTACAGCCGATC
ATCAACCGGCTGATGCACAATGTGGCCCACGACGAGGAGTTCATCACGAC
GACGCTGGCGGAGACGATCAAAGTGGACGAGTTCACGGCCAATCTGTTCA
ACATCTATCGCAAGGTGCTGGCGCACGGATTCACCCAGAAAACATCGCTG
GGGATGCTGCGCAGCGATCTGATGCTGGAGTCCGGCTGTCCCGAGCTGTC
GCCACGGGCGCTGCGAACGGCGGCCGGTGAGGATCGTGGTCAGGATGCGG
GCGCTGCTGTGGGGCAAATAGCTGGAGCTAACGGAGCTGCAGGAGTCGGA
ACTGCCGCTGGCACGGGCAGCAAGGAGGAGGAGCACAGGGAGGTCCAGCT
AAGCCGGGTCACCAAAGAGCCGGAACGGAGGGCGACCGGCGCCCAGTCCG
CTTACTGCTGCTGGAAGCAAGTCGAGATCAATACGATAGCATCGGGCTTT
GGCCACTTGGGACCAGCAAGTAAAACCATACAAAGATTGTTGCCTAGAGT
TTTCATTTGCTGAAAGCTTTCTAGACCAT
BS27767.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:10:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GS-RG | 747 | CG6835-PG | 1..747 | 17..763 | 3735 | 100 | Plus |
| CG32495-RE | 747 | CG32495-PE | 1..747 | 17..763 | 3735 | 100 | Plus |
| GS-RI | 1689 | CG6835-PI | 1..722 | 17..738 | 3610 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:10:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GS-RG | 1337 | CG6835-RG | 165..912 | 16..763 | 3740 | 100 | Plus |
| CG32495-RE | 1337 | CG32495-RE | 165..912 | 16..763 | 3740 | 100 | Plus |
| GS-RI | 2151 | CG6835-RI | 314..1036 | 16..738 | 3615 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:10:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17891586..17891934 | 387..735 | 1745 | 100 | Plus |
| X | 23542271 | X | 17901741..17902089 | 387..735 | 1745 | 100 | Plus |
| X | 23542271 | X | 17890461..17890673 | 176..388 | 1065 | 100 | Plus |
| X | 23542271 | X | 17900616..17900828 | 176..388 | 1065 | 100 | Plus |
| X | 23542271 | X | 17889990..17890149 | 16..175 | 800 | 100 | Plus |
| X | 23542271 | X | 17900145..17900304 | 16..175 | 800 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:10:19 has no hits.
BS27767.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-27 18:31:08 Download gff for
BS27767.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GS-RG | 166..911 | 17..762 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:05:36 Download gff for
BS27767.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GS-RG | 166..911 | 17..762 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:14:49 Download gff for
BS27767.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32495-RE | 166..911 | 17..762 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:14:49 Download gff for
BS27767.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17889991..17890149 | 17..175 | 100 | -> | Plus |
| X | 17890461..17890673 | 176..388 | 100 | -> | Plus |
| X | 17892452..17892478 | 736..762 | 100 | | Plus |
| X | 17891588..17891934 | 389..735 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:05:36 Download gff for
BS27767.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17784024..17784182 | 17..175 | 100 | -> | Plus |
| arm_X | 17784494..17784706 | 176..388 | 100 | -> | Plus |
| arm_X | 17785621..17785967 | 389..735 | 100 | -> | Plus |
| arm_X | 17786485..17786511 | 736..762 | 100 | | Plus |
BS27767.pep Sequence
Translation from 16 to 762
> BS27767.pep
MSSDANTAVLRNCIRLPLAEDELLEVTAKAKDYAIMHGAAMRSKTAFSPD
SLNFAPFVLVPSSFPRKEFEKAVALQPIINRLMHNVAHDEEFITTTLAET
IKVDEFTANLFNIYRKVLAHGFTQKTSLGMLRSDLMLESGCPELSPRALR
TAAGEDRGQDAGAAVGQIAGANGAAGVGTAAGTGSKEEEHREVQLSRVTK
EPERRATGAQSAYCCWKQVEINTIASGFGHLGPASKTIQRLLPRVFIC*
BS27767.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:20:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GS-PG | 248 | CG6835-PG | 1..248 | 1..248 | 1262 | 100 | Plus |
| CG32495-PE | 248 | CG32495-PE | 1..248 | 1..248 | 1262 | 100 | Plus |
| GS-PI | 562 | CG6835-PI | 1..242 | 1..242 | 1220 | 99.2 | Plus |
| GS-PH | 562 | CG6835-PH | 1..242 | 1..242 | 1220 | 99.2 | Plus |
| CG32495-PH | 562 | CG32495-PH | 1..242 | 1..242 | 1220 | 99.2 | Plus |
