BS27774.complete Sequence
644 bp assembled on 2011-09-22
GenBank Submission: KX805685
> BS27774.complete
GAAGTTATCAGTCGACATGGAGCGAATAACATCGCCGGTGCTCGCGTATC
CACGTGGATATACCGAATTTTCGGATCACAAAATGTCGAATATACCGCCG
TATTTGGTGTTCTTCTTCCTGGCCTTCATTTCCTGTGCGGTCACCTTCTG
CTGCCTGAGATTCTGCATTTGGGTGTGCTTCGAGGCCAGGGATTCCAGGA
GTCGCAGACGCCGACATGATCGTAATGTATTCAACGCACAGGAGGATCCT
TCATCGAACCGCTATGGCGACATTTTCTTCATCGAACCCGGCAGCGTGGA
GGCCAACCGCATTCGCGATCAACTGGAAAAGGATGAAAAGGATTTACCCA
GCTACGACGAGGTGATGCGCATGTGTAACCTGACCACTCCCACAGCAGCA
GCGGCTGGAATGCCTGTTCCCCAATCGCCCCTCGGTGTACCCAGTCCCAT
TGGAATCGCGGCACTGCCGGCGCCACCGTATTCGGAGACAGATCCACATT
CCTCGTCCGCCGCAGAAGCCACTGTCATCGCAATGGAACCGATGGAGCCA
TCCACCTCCCGCGCGGCACAGATTCCACCCAGCTCCGGATCTGGTCCTCC
TGCTCCATTGCCAACGACAGCGGTGTGAAAGCTTTCTAGACCAT
BS27774.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:13:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12963-RE | 612 | CG12963-PE | 1..612 | 17..628 | 3060 | 100 | Plus |
| CG12963-RD | 561 | CG12963-PD | 145..561 | 212..628 | 2070 | 99.8 | Plus |
| CG12963-RJ | 540 | CG12963-PJ | 129..540 | 217..628 | 2060 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:13:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12963-RE | 1108 | CG12963-RE | 284..896 | 16..628 | 3065 | 100 | Plus |
| CG12963-RD | 814 | CG12963-RD | 186..602 | 212..628 | 2070 | 99.8 | Plus |
| CG12963-RJ | 782 | CG12963-RJ | 159..570 | 217..628 | 2060 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:13:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15561814..15562224 | 218..628 | 2055 | 100 | Plus |
| 2R | 25286936 | 2R | 15559520..15559722 | 16..218 | 1015 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 08:13:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 3427..3468 | 332..291 | 111 | 73.8 | Minus |
BS27774.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-22 16:40:51 Download gff for
BS27774.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12963-RE | 9..619 | 17..627 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:56:24 Download gff for
BS27774.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12963-RE | 285..895 | 17..627 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:13:26 Download gff for
BS27774.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12963-RE | 285..895 | 17..627 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:13:26 Download gff for
BS27774.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15559521..15559722 | 17..218 | 100 | -> | Plus |
| 2R | 15561815..15562223 | 219..627 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:56:24 Download gff for
BS27774.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11449320..11449728 | 219..627 | 100 | | Plus |
| arm_2R | 11447026..11447227 | 17..218 | 100 | -> | Plus |
BS27774.pep Sequence
Translation from 16 to 627
> BS27774.pep
MERITSPVLAYPRGYTEFSDHKMSNIPPYLVFFFLAFISCAVTFCCLRFC
IWVCFEARDSRSRRRRHDRNVFNAQEDPSSNRYGDIFFIEPGSVEANRIR
DQLEKDEKDLPSYDEVMRMCNLTTPTAAAAGMPVPQSPLGVPSPIGIAAL
PAPPYSETDPHSSSAAEATVIAMEPMEPSTSRAAQIPPSSGSGPPAPLPT
TAV*
BS27774.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:17:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12963-PE | 203 | CG12963-PE | 1..203 | 1..203 | 1077 | 100 | Plus |
| CG12963-PH | 197 | CG12963-PH | 7..197 | 29..203 | 738 | 76.4 | Plus |
| CG12963-PJ | 179 | CG12963-PJ | 11..179 | 35..203 | 727 | 85.5 | Plus |
| CG12963-PI | 179 | CG12963-PI | 7..179 | 33..203 | 722 | 83.8 | Plus |
| CG12963-PD | 186 | CG12963-PD | 38..186 | 55..203 | 722 | 93.3 | Plus |
