BS27782.complete Sequence
590 bp assembled on 2011-09-22
GenBank Submission: KX804288
> BS27782.complete
GAAGTTATCAGTCGACATGAAAGGTTTTCAGATAATCGGATTACTTGGAT
TGTTTGCACTCCTTGTAAGTGGATCGACCTCGTCTGGAGAAGATACCAAC
ATCAAACTAACAACAGACGAATCTACTACTGTGGAGGATACCACGGAGGT
TTTAGTCACAACACTACCACCTCCAGTCCTGTGTGCTGATGAAGATCTGT
TTCTCCCAGCACCCGACTGCAGAGAGTATTATCAATGCCTGTACGGTGAG
GGAATTTTAAAGATATGTCCAGACGGCCTCTATTGGGATCGGGAGCTGAA
TGTTTGCGCCTGGGACTCACAGCATTGTGCTGATGACAAGAACGAGACCA
CCACACCATCGACCTTGAATTGCGCATCCGGGTTACCATTTTTGCCCTAT
ATACCGGACTGCACTAAGTTTATCCAGTGCGTCTACAATATTGGCTTTAA
ACTAAGCTGCCCGAGTGGTTTGTATTGGAACCAACCTCTTCAATCGTGTG
ACTATACCTGCGATAATGCGATTGAGTTCTCTGGCGCACACCAAGTGCAA
TAAAAGCTTTCTAGACCATTCGTTTGGCGCGCAAAAGGCG
BS27782.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:16:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42397-RA | 537 | CG42397-PA | 1..537 | 17..553 | 2685 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:16:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42397-RA | 651 | CG42397-RA | 35..573 | 15..553 | 2695 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:16:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11973163..11973695 | 553..21 | 2665 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 08:16:16 has no hits.
BS27782.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-22 16:40:53 Download gff for
BS27782.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42397-RA | 37..577 | 17..557 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:56:54 Download gff for
BS27782.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42397-RA | 37..577 | 17..557 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:14:30 Download gff for
BS27782.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42397-RA | 37..577 | 17..557 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:14:30 Download gff for
BS27782.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11973159..11973696 | 17..557 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:56:54 Download gff for
BS27782.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11966259..11966796 | 17..557 | 99 | | Minus |
BS27782.pep Sequence
Translation from 16 to 552
> BS27782.pep
MKGFQIIGLLGLFALLVSGSTSSGEDTNIKLTTDESTTVEDTTEVLVTTL
PPPVLCADEDLFLPAPDCREYYQCLYGEGILKICPDGLYWDRELNVCAWD
SQHCADDKNETTTPSTLNCASGLPFLPYIPDCTKFIQCVYNIGFKLSCPS
GLYWNQPLQSCDYTCDNAIEFSGAHQVQ*
BS27782.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:17:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42397-PA | 178 | CG42397-PA | 1..178 | 1..178 | 984 | 100 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 1580..1734 | 8..164 | 246 | 34.8 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 1684..1792 | 51..162 | 209 | 35.4 | Plus |
| CG17826-PA | 751 | CG17826-PA | 27..128 | 54..165 | 180 | 36.3 | Plus |
| CG43294-PB | 124 | CG43294-PB | 13..123 | 67..165 | 138 | 32.5 | Plus |
| CG43294-PA | 124 | CG43294-PA | 13..123 | 67..165 | 138 | 32.5 | Plus |
