BS27785.complete Sequence
350 bp assembled on 2011-09-22
GenBank Submission: KX801287
> BS27785.complete
GAAGTTATCAGTCGACATGAATGCTTTGAATGCTTTTGGAATGGCCATCG
GCTGGATGGACATTGCGGGAGTTTTGTTCTTCGAAATGATAATGTTCTAT
ATGATGCGACGTCGTCGATTGGCACAAAAATCAGAAGTTGCATCGATTGA
AGCACAAGAGAAGTGCCATAGAGATTCATTGCCCAATCTCTTGACAAGGA
AAAAGCTGAGTGAAAGCGAAAACATTTGGATATTCTGGGGCTACCTGTTG
ATGCTGAATATTTGGATTGGGGTCACTCTGCTCATGATAGCTGGCATCTC
ATTTGTGGGTGAAAACAAAAACCGGAGCTTATGAAAGCTTTCTAGACCAT
BS27785.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:09:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43127-RC | 318 | CG43127-PC | 1..318 | 17..334 | 1590 | 100 | Plus |
| CG43127-RD | 573 | CG43127-PD | 1..288 | 17..304 | 1440 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:09:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43127-RC | 698 | CG43127-RC | 37..354 | 17..334 | 1590 | 100 | Plus |
| CG43127-RD | 687 | CG43127-RD | 37..324 | 17..304 | 1440 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:09:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 10625395..10625563 | 185..17 | 845 | 100 | Minus |
| 3L | 28110227 | 3L | 10625206..10625335 | 315..186 | 650 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 08:09:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Idefix | 7411 | Idefix DME9736 7411bp Derived from AJ009736 (e1371475) (Rel. 58, Last updated, Version 1). | 5241..5272 | 103..72 | 106 | 81.2 | Minus |
BS27785.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-22 16:40:49 Download gff for
BS27785.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43127-RC | 37..353 | 17..333 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:55:55 Download gff for
BS27785.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43127-RC | 37..353 | 17..333 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:12:04 Download gff for
BS27785.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43127-RC | 37..353 | 17..333 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:12:04 Download gff for
BS27785.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 10625395..10625563 | 17..185 | 100 | | Minus |
| 3L | 10625134..10625151 | 316..333 | 100 | <- | Minus |
| 3L | 10625206..10625335 | 186..315 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:55:55 Download gff for
BS27785.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 10618234..10618251 | 316..333 | 100 | <- | Minus |
| arm_3L | 10618306..10618435 | 186..315 | 100 | <- | Minus |
| arm_3L | 10618495..10618663 | 17..185 | 100 | | Minus |
BS27785.pep Sequence
Translation from 16 to 333
> BS27785.pep
MNALNAFGMAIGWMDIAGVLFFEMIMFYMMRRRRLAQKSEVASIEAQEKC
HRDSLPNLLTRKKLSESENIWIFWGYLLMLNIWIGVTLLMIAGISFVGEN
KNRSL*
BS27785.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:16:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43127-PC | 105 | CG42519-PA | 1..105 | 1..105 | 542 | 100 | Plus |
| CG43127-PD | 190 | CG43127-PD | 1..96 | 1..96 | 497 | 100 | Plus |
