BS27792.complete Sequence
1064 bp assembled on 2011-09-27
GenBank Submission: KX802867
> BS27792.complete
GAAGTTATCAGTCGACATGAGAGTTCCGCCATGTGGATTCCATTTGTGTG
TCATTTTGGCCATAGTCGCGGAGATTAGAGGATTTTCGATGGAGGACAAG
TGCAAATTGTGGGCTGGAACTGGCTATATTGGTGATCCCAGTGATTGCCA
GGCCTGGGGATATTGCCAGGACAACAAACTCATCGATAGACGTAGCTGCA
CTGAAGGATTACTATACAGTTTCCGAGATGGCACCTGCAAGAGGGCATCC
GATACGATTTGTCATTCCCAGCTCTCGGAGATTTGCGCCAGCCTCGAGCC
TTGGAATTACGTGGCCAACCCAGCTGATTGTCGGAGATTCGTCAAGTGCG
CGGATTTGGATGATCCCACTTGGGGCGACTGTGGTGTGGGTCAGGTGTTT
AGCAACAAGAAGCAGACCTGCCTCGAGGAGGTTGCCGGCTGTCCACAGGA
TAATATCTGCTCCCATATGAAAGATGGCTCCTTTGTGGGCGATCCCAAGA
GCTGTCAAATCTACTATAAATGCCATAATGGATTTGGCACCATGTTGAAT
TGCTCCGTTGGGCGATACTTTAATCGCAAAACGGGTAATTGCCAATCCTG
GATGCCGCATTACTGTTCCAAGGATGATGAGGATAACATATTAACGCCAC
CATCCACGGACCATAATATCTGCTCCAAGTATTATCAACGGGATAGAGAT
GGAGTGCAACTCCTGCCGGATCTGATGACCTGTTACGGATATTACTCCTG
CACATCCCAGTTCGACGTGGGCAAGTGGAGCAGCTGTCCTTGGGGACTGC
ACTTTGAGTGGTGGAGCCAGCGGTGTGGCTCGCCGAAAGACAATAGCTGC
TCCTACGATCGCTGCGCCAATAGGAACCAACTAATGGTGGCCACCATTAA
CACGGGCTGCAGGGAGTTCACGATCTGTCAAGATAATCGTTCGAAGAGCT
CGCAAAAGTGTCCGGAGGACTATCCATATTTCAATGAGCTATTGCGACAG
TGCACCGATGAATATCCCAATCATAGGGTGTGCTACATGGATGGATAAAA
GCTTTCTAGACCAT
BS27792.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:10:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5897-RB | 960 | CG5897-PB | 1..960 | 89..1048 | 4800 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:10:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5897-RB | 1671 | CG5897-RB | 14..1046 | 17..1049 | 5165 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:10:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11887884..11888911 | 1049..22 | 5140 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:10:38 has no hits.
BS27792.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-27 18:36:59 Download gff for
BS27792.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5897-RB | 14..1043 | 17..1046 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:05:40 Download gff for
BS27792.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5897-RB | 14..1043 | 17..1046 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:14:56 Download gff for
BS27792.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5897-RB | 14..1043 | 17..1046 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:14:56 Download gff for
BS27792.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11887887..11888916 | 17..1046 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:05:40 Download gff for
BS27792.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11880987..11882016 | 17..1046 | 99 | | Minus |
BS27792.pep Sequence
Translation from 16 to 1047
> BS27792.pep
MRVPPCGFHLCVILAIVAEIRGFSMEDKCKLWAGTGYIGDPSDCQAWGYC
QDNKLIDRRSCTEGLLYSFRDGTCKRASDTICHSQLSEICASLEPWNYVA
NPADCRRFVKCADLDDPTWGDCGVGQVFSNKKQTCLEEVAGCPQDNICSH
MKDGSFVGDPKSCQIYYKCHNGFGTMLNCSVGRYFNRKTGNCQSWMPHYC
SKDDEDNILTPPSTDHNICSKYYQRDRDGVQLLPDLMTCYGYYSCTSQFD
VGKWSSCPWGLHFEWWSQRCGSPKDNSCSYDRCANRNQLMVATINTGCRE
FTICQDNRSKSSQKCPEDYPYFNELLRQCTDEYPNHRVCYMDG*
BS27792.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:20:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5897-PB | 319 | CG5897-PB | 1..319 | 25..343 | 1861 | 100 | Plus |
| CG6933-PE | 351 | CG6933-PE | 8..345 | 10..339 | 610 | 34.8 | Plus |
| CG6933-PB | 351 | CG6933-PB | 8..345 | 10..339 | 610 | 34.8 | Plus |
| CG6933-PA | 351 | CG6933-PA | 8..345 | 10..339 | 610 | 34.8 | Plus |
| CG6933-PD | 363 | CG6933-PD | 20..357 | 10..339 | 610 | 34.8 | Plus |
