BS27795.complete Sequence
953 bp assembled on 2011-09-27
GenBank Submission: KX803054
> BS27795.complete
GAAGTTATCAGTCGACATGGAGATTGAAAATAAAGTCCAGTCGGCAGAGA
AATGTCCTTTGCAGATAATTCAGCACAATGACGCTACGTTTATTGGTTGC
GATTCAAGCAACCGCGATTTGGAAAAGTGCCGCAGCTGCCTCACTTCCTT
CTGCCGTAAACCCATTAAGATTTACCATAATTCCCGGAACTATCTGGCCT
GCGAGGTCCAGAGATCACAATCTATAAATTCCATAAAGTCACTGCCAGTC
AAATTTCCATCAACACCAAATAGATCACTTAACACAGAAAAGGATTGGTC
GCATGGTAAAAGGTGTTTACAATGCGCAGCTCCCAAGTGCAAAACATCTT
CCAGAAGTTCCATTCAGTCGAAAAAACTGAAAAAAGATAAGAAGTCTCTG
TTAAAGGAATTTGAAATATACAAAATTCCTATCATTCGACGCAAGCCTAT
AAAACAAGCTGTACTAAGGGAAACCAATAAGTACCGAAGGCTTCACAACG
CCAATCCCCTGAAAATGGATGAAAAACTTTGTTCCTATGCACAGGAGTGG
GCAGATCATTTGGCTGATCTGAACAAACTGGAAACTCGACCTAATCCTCT
TTACGGCGAGAATATTATGCGTGTCCGGAGATCCAAATTCTCCGTGGATC
AAATACTGAAACTCTGGTACCAAGAAAAATACAATTACGATTACTTAAAG
CCAGGCTTTAATTTGTACACTGGACATTTTACCCAGTTGGTTTGGAGAGA
GTCAGAGTTCCTGGGAGTGGGCGTGGCATGCGATGTTTCCTCCATTTGGA
TTGTGTGCAATTACCATCCGCCTGGAAATGTAAGCGAACATTTCAGGGAA
AATGTCCTGCCTAGAAAATTCCTTCTACTTAAATCGGACTTGGATGCCAA
GGAAACTAGAAAATCGAAACATCACAATTTAAAATAGAAGCTTTCTAGAC
CAT
BS27795.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:11:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34049-RB | 921 | CG34049-PB | 1..921 | 17..937 | 4590 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:11:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34049-RB | 967 | CG34049-RB | 11..933 | 17..939 | 4600 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:11:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2264772..2265311 | 556..17 | 2700 | 100 | Minus |
| 2L | 23513712 | 2L | 2264483..2264709 | 783..557 | 1120 | 99.6 | Minus |
| 2L | 23513712 | 2L | 2264265..2264420 | 939..784 | 780 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 10:11:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TAHRE | 10463 | TAHRE OSV 10463bp | 7340..7408 | 372..443 | 119 | 65.3 | Plus |
BS27795.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-27 18:36:59 Download gff for
BS27795.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34049-RB | 11..924 | 17..930 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:05:46 Download gff for
BS27795.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34049-RB | 11..924 | 17..930 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:15:07 Download gff for
BS27795.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34049-RB | 11..924 | 17..930 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:15:07 Download gff for
BS27795.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2264274..2264420 | 784..930 | 100 | <- | Minus |
| 2L | 2264483..2264709 | 557..783 | 99 | <- | Minus |
| 2L | 2264772..2265311 | 17..556 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:05:46 Download gff for
BS27795.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2264274..2264420 | 784..930 | 100 | <- | Minus |
| arm_2L | 2264483..2264709 | 557..783 | 99 | <- | Minus |
| arm_2L | 2264772..2265311 | 17..556 | 100 | | Minus |
BS27795.pep Sequence
Translation from 16 to 936
> BS27795.pep
MEIENKVQSAEKCPLQIIQHNDATFIGCDSSNRDLEKCRSCLTSFCRKPI
KIYHNSRNYLACEVQRSQSINSIKSLPVKFPSTPNRSLNTEKDWSHGKRC
LQCAAPKCKTSSRSSIQSKKLKKDKKSLLKEFEIYKIPIIRRKPIKQAVL
RETNKYRRLHNANPLKMDEKLCSYAQEWADHLADLNKLETRPNPLYGENI
MRVRRSKFSVDQILKLWYQEKYNYDYLKPGFNLYTGHFTQLVWRESEFLG
VGVACDVSSIWIVCNYHPPGNVSEHFRENVLPRKFLLLKSDLDAKETRKS
KHHNLK*
BS27795.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:20:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34049-PB | 306 | CG34049-PB | 1..306 | 1..306 | 1642 | 100 | Plus |
| CG4270-PA | 170 | CG4270-PA | 35..170 | 149..284 | 316 | 44.1 | Plus |
| CG16995-PA | 146 | CG16995-PA | 7..143 | 146..282 | 314 | 45.3 | Plus |
| CG31482-PA | 195 | CG31482-PA | 27..159 | 150..282 | 246 | 39.7 | Plus |
| CG4270-PB | 142 | CG4270-PB | 35..140 | 149..254 | 231 | 43.4 | Plus |
