Clone BS27811 Report

Search the DGRC for BS27811

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:278
Well:11
Vector:pDNR-Dual
Associated Gene/TranscriptCG42810-RA
Protein status:BS27811.pep: gold
Sequenced Size:362

Clone Sequence Records

BS27811.complete Sequence

362 bp assembled on 2011-09-22

GenBank Submission: KX803698

> BS27811.complete
GAAGTTATCAGTCGACATGTTTCCCACCTATTCGATCAATGATGTCGCCG
CCAATGAGGAAGTAGATCATACCCAGCAAGACTTATCTTCAAAAGTCGAA
GCCGATATGCAGTCGATCATTCGTTTGGCCTACCAGGAGAACGAGGCTCT
GATCCACCAAAAAGTTATGAGCGCGATGAAGCAACGCGAAGAGGAGTTGG
CCAAGCTGTGGGATATTCGATCATCATTATCAAGCTTAGCGCAGATCAGG
GCTGCTCGTGATGAGGAACTAAGAGCTCTATTGGACCAAATCGTTTCGAA
TGCGGACAGTAGCGATGAAGATGAAGAAAAGGAAGATCCCTTTTAAAAGC
TTTCTAGACCAT

BS27811.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:48:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG42810-RA 330 CG42810-PA 1..330 17..346 1650 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:48:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG42810-RA 503 CG16849-RA 136..465 17..346 1650 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:48:55
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13459816..13460145 17..346 1650 100 Plus
Blast to na_te.dros performed 2014-11-27 08:48:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dbuz\BuT2 2775 Dbuz\BuT2 BUT2 2775bp 143..184 352..311 102 71.4 Minus

BS27811.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-22 16:41:14 Download gff for BS27811.complete
Subject Subject Range Query Range Percent Splice Strand
CG42810-RA 50..371 23..344 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:02:13 Download gff for BS27811.complete
Subject Subject Range Query Range Percent Splice Strand
CG42810-RA 50..371 23..344 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:26:56 Download gff for BS27811.complete
Subject Subject Range Query Range Percent Splice Strand
CG42810-RA 142..463 23..344 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:26:56 Download gff for BS27811.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13459822..13460143 23..344 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:02:13 Download gff for BS27811.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13459822..13460143 23..344 100   Plus

BS27811.pep Sequence

Translation from 16 to 345

> BS27811.pep
MFPTYSINDVAANEEVDHTQQDLSSKVEADMQSIIRLAYQENEALIHQKV
MSAMKQREEELAKLWDIRSSLSSLAQIRAARDEELRALLDQIVSNADSSD
EDEEKEDPF*

BS27811.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:19:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG42810-PA 109 CG16849-PA 1..109 1..109 536 100 Plus