Clone BS27825 Report

Search the DGRC for BS27825

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:278
Well:25
Vector:pDNR-Dual
Associated Gene/TranscriptCG15260-RB
Protein status:BS27825.pep: gold
Sequenced Size:725

Clone Sequence Records

BS27825.complete Sequence

725 bp assembled on 2011-09-22

GenBank Submission: KX800835

> BS27825.complete
GAAGTTATCAGTCGACATGAAGCGAATTGTGCCACTTTCAGCAGACTTAT
TAAGTGACATAATGACCCACCGGAATGAGTATCACACACCACCTGGGCAT
TATATAGAGGCAGAACAAGTGGGTGATAACAGAGGACTATATGCGGCAAC
CAGTTCCCCCCAATTCTTGCCATCGGATGCGAGGCAACGCACTGATGGAT
TTGCCGATGGACCCATTGTGGCGACCACTCCCGTTTCAGAACTGACACCC
AGTGAGGTACTGACCAGACTTGAGGCACGCCTGGATTTCTTGGCGGCGGA
AGTGCAAGAACTGCGCAAGTTGATACCTAAACCAATCAATCAGAATGAGG
AGCCCTGCACGAGCGGGTCATATGGCTTAAAGCGCTCTCAATCCGATCTA
TCGTTGATCCTTAAGTCGAGCTCGGACCTGAGACTCATCAATTCCTCCAA
CGATCTGCATCTGCGAGGGGAGCAGTCGCTGGACAAACGCAATCGCAAGG
GGCAGTTGTACCGCGACATGCAGATGCATCTGACCAATATGATAGTCGTG
CCCAAGTCACGCACCTCACTGTTTCTCAACCAGCGAAAGGAATTGAACTC
CCAATTGTGCCATTGGCGGCATCAATATTCGGATGAGGATTGGATGCAGA
ATTTCCAGAGCAGCTCCACGGAGGCCGAGCGGCGCTTCAAGAATGTGCGT
CGTCAGTGAAAGCTTTCTAGACCAT

BS27825.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:52:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG15260-RB 693 CG15260-PB 1..693 17..709 3465 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:53:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG15260-RB 814 CG15260-RB 67..762 17..712 3480 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:52:56
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15291478..15292173 712..17 3480 100 Minus
Blast to na_te.dros performed on 2014-11-27 08:52:58 has no hits.

BS27825.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-22 16:41:17 Download gff for BS27825.complete
Subject Subject Range Query Range Percent Splice Strand
CG15260-RB 67..758 17..708 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:02:42 Download gff for BS27825.complete
Subject Subject Range Query Range Percent Splice Strand
CG15260-RB 67..758 17..708 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:28:03 Download gff for BS27825.complete
Subject Subject Range Query Range Percent Splice Strand
CG15260-RB 67..758 17..708 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:28:03 Download gff for BS27825.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15291482..15292173 17..708 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:02:42 Download gff for BS27825.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15291482..15292173 17..708 100   Minus

BS27825.pep Sequence

Translation from 16 to 708

> BS27825.pep
MKRIVPLSADLLSDIMTHRNEYHTPPGHYIEAEQVGDNRGLYAATSSPQF
LPSDARQRTDGFADGPIVATTPVSELTPSEVLTRLEARLDFLAAEVQELR
KLIPKPINQNEEPCTSGSYGLKRSQSDLSLILKSSSDLRLINSSNDLHLR
GEQSLDKRNRKGQLYRDMQMHLTNMIVVPKSRTSLFLNQRKELNSQLCHW
RHQYSDEDWMQNFQSSSTEAERRFKNVRRQ*

BS27825.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:20:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG15260-PB 230 CG15260-PB 1..230 1..230 1187 100 Plus