BS27829.complete Sequence
926 bp assembled on 2011-09-22
GenBank Submission: KX805048
> BS27829.complete
GAAGTTATCAGTCGACATGAACTCCTACGACCCACAGGACACAGCTTCTC
AACAGGAGGAATCCGTCGCGCTGAAGGGCCACTTCTACGGCGTCTATTTG
CTATGCAGTCAGAGCTTGGATCCTCGCTACCGGGGAAAATGCTACGTGGG
CTTCACCGTGAACCCCAAACGGCGGATACGCCAACACAATCTTGGTTGTG
ATTTCGGTGGCGCGAGGAAAACCAGTCGCAAAGGGCCGTGGCTGATGGTA
ATGATCGTGCACGGATTCCCGAATAATACAGTGGCACTCCAGTTTGAATG
GGCTTGGCAACAGCCGTCGCTTTCAACTAGGCTTAAAATGTACCCTGAAT
TAAAACGAAAACTGCCCAGGGAGACGTTCTTTGACTACAACTTTAGGATC
CTTAGTAATATGCTGGGGGTTGGCCCTTGGAATAGATTACCGCTCACCGT
TCGCTGGCTAGAAACGGATTACGAGAGGCCATTCAGCAAGGCACTGCCTA
AACACATGGAAATTGTGAGTGGCAAGGTTTCCATTAGTGCCTCACAACGT
AGGAGACCTGATGATGCAGTACCTCCTCCACCTGTGGCGTGGGCTTCCGA
GTGCCACCTTTGTATGCAGGAAATGGAGCAACCGGAGAAATCCCGCCTGG
GATGCACAAATCAAATGTGTCGGCTGACATGCCATATGGTGTGCCTGGCC
AATTACCTTCTGGGCGACGAGCCAGGTCATTACATCCCAGTTGGAGGAGA
GTGTCCGCTTTGTGAGACTCGTCTCAGCTGGGCAGCACTGCTGCAGCGCA
AACGTCTTCTTTTGGGCGTGCCTGAAGAACTGCAGGATCATGACGAGGAT
CTGAGCGACGACATTGATGTAGACAGCGATATTGAAGATACCCCGGAGCT
CAGCGATTAGAAGCTTTCTAGACCAT
BS27829.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:53:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
slx1-RB | 894 | CG18271-PB | 1..894 | 17..910 | 4470 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:53:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
slx1-RB | 1139 | CG18271-RB | 34..927 | 17..910 | 4470 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:53:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 4643543..4644424 | 29..910 | 4410 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:53:03 has no hits.
BS27829.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-22 16:41:17 Download gff for
BS27829.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18271-RB | 23..916 | 17..910 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:02:43 Download gff for
BS27829.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
slx1-RB | 34..927 | 17..910 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:28:06 Download gff for
BS27829.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
slx1-RB | 34..927 | 17..910 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:28:06 Download gff for
BS27829.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 4643544..4644424 | 30..910 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:02:43 Download gff for
BS27829.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 469266..470146 | 30..910 | 100 | | Plus |
BS27829.pep Sequence
Translation from 16 to 909
> BS27829.pep
MNSYDPQDTASQQEESVALKGHFYGVYLLCSQSLDPRYRGKCYVGFTVNP
KRRIRQHNLGCDFGGARKTSRKGPWLMVMIVHGFPNNTVALQFEWAWQQP
SLSTRLKMYPELKRKLPRETFFDYNFRILSNMLGVGPWNRLPLTVRWLET
DYERPFSKALPKHMEIVSGKVSISASQRRRPDDAVPPPPVAWASECHLCM
QEMEQPEKSRLGCTNQMCRLTCHMVCLANYLLGDEPGHYIPVGGECPLCE
TRLSWAALLQRKRLLLGVPEELQDHDEDLSDDIDVDSDIEDTPELSD*
BS27829.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:20:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
slx1-PB | 297 | CG18271-PB | 1..297 | 1..297 | 1626 | 100 | Plus |