BS27906.complete Sequence
524 bp assembled on 2011-09-30
GenBank Submission: KX802054
> BS27906.complete
GAAGTTATCAGTCGACATGCGTCGCACTTGGGTCCTGTTTTACTTATTCC
TAATTGGGTTGGCATTGGTAAAGACCACACCGAAAGAACTTCACTCAGAA
TCGATTTTTGAAGATGACGTCGCTCTAAGGTCCAAGTCAAGTAAAGCTGA
TGCTCTGCTTACAAAAACTACAACAAAAGCGTCAGCATCAAATTTATTCT
TTAAAGTCATTACAACAACCCGACCACCTGTGACAATCAGGCGCGTTGTA
GCCAAGTCAAAGGGTAAGGATCCAGAAAGAACTGACCTCCACCGCAAGCA
CCTCACACATCACAAACATCACTCAAAAAACAAAAAAAAGAATCCACATA
ATCGTGCCGAAGCGAATCGAAACAAGGATCATAGTCCCCATGATCCCCAC
AAAAACCTGAAAAGAAAGGCAGAGGCACTCCCTAAGTCAAATCAGAATAT
AAATGGCACTACTTCTCTGGAAGCCAAGAGTACGTCTTTAAAAGATGTAC
ATAAGTGAAAGCTTTCTAGACCAT
BS27906.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:35:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32457-RB | 492 | CG32457-PB | 1..492 | 17..508 | 2460 | 100 | Plus |
| CG32457-RC | 426 | CG32457-PC | 125..426 | 207..508 | 1510 | 100 | Plus |
| CG32457-RC | 426 | CG32457-PC | 1..124 | 17..140 | 620 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:35:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32457-RB | 621 | CG32457-RB | 28..520 | 17..509 | 2465 | 100 | Plus |
| CG32457-RC | 555 | CG32457-RC | 152..454 | 207..509 | 1515 | 100 | Plus |
| CG32457-RC | 555 | CG32457-RC | 28..151 | 17..140 | 620 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:35:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22987669..22988161 | 17..509 | 2465 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:35:09 has no hits.
BS27906.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-30 10:49:37 Download gff for
BS27906.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32457-RB | 28..518 | 17..507 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:13:29 Download gff for
BS27906.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32457-RB | 28..518 | 17..507 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:25:43 Download gff for
BS27906.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32457-RB | 28..518 | 17..507 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:25:43 Download gff for
BS27906.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22987669..22988159 | 17..507 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:13:29 Download gff for
BS27906.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22980769..22981259 | 17..507 | 100 | | Plus |
BS27906.pep Sequence
Translation from 16 to 507
> BS27906.pep
MRRTWVLFYLFLIGLALVKTTPKELHSESIFEDDVALRSKSSKADALLTK
TTTKASASNLFFKVITTTRPPVTIRRVVAKSKGKDPERTDLHRKHLTHHK
HHSKNKKKNPHNRAEANRNKDHSPHDPHKNLKRKAEALPKSNQNINGTTS
LEAKSTSLKDVHK*
BS27906.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:22:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32457-PB | 163 | CG32457-PB | 1..163 | 1..163 | 846 | 100 | Plus |
| CG32457-PC | 141 | CG32457-PC | 1..141 | 1..163 | 708 | 85.9 | Plus |
