BS27916.complete Sequence
485 bp assembled on 2011-09-30
GenBank Submission: KX804037
> BS27916.complete
GAAGTTATCAGTCGACATGCGTCTAGGCCAGCACTTCGATGACCAGTTAA
AGCTGGCTAGCGTCGAGTTGGGCGATTTCTCGGACGATGACCTGGCGCTC
CTTGACAAATGCGCCCAATATTATTCACTTTTGCACATTCACGACATCAA
TCTGAACTACTTGCGCGACTTCTATTGTGCCAAGAAGAGGGAATGCATAG
AAAACCGGCAGACCACAGTGCAGCAACGCGTAGAGCTGCAGCGCATCCTC
TCGTCCATCGAGGAGGCTACTAGGGACGTAGTTATGTTGGAGAGATTTAA
TGCTGCTGCGGAAGAGCGGCTCATCCCGGATATCGTCGTAATGCAGCGAA
ACGCCCAACAGCTTGCAACAAAACAGGCCTTACTGGACCGGCAAAAAACC
CTTAAGATCCCAAAGGATTTTAGCATTGAAAGTGTCATCGAGAAGGTAGA
TTCGCTGGAGCAGCGCTAAAAGCTTTCTAGACCAT
BS27916.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:39:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
wac-RD | 492 | CG13879-PD | 40..492 | 17..469 | 2250 | 99.8 | Plus |
wac-RC | 453 | CG13879-PC | 1..453 | 17..469 | 2250 | 99.8 | Plus |
wac-RB | 492 | CG13879-PB | 40..492 | 17..469 | 2250 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:39:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
wac-RD | 808 | CG13879-RD | 256..709 | 17..470 | 2255 | 99.8 | Plus |
wac-RC | 633 | CG13879-RC | 81..534 | 17..470 | 2255 | 99.8 | Plus |
wac-RB | 634 | CG13879-RB | 82..535 | 17..470 | 2255 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:39:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 258486..258763 | 17..294 | 1375 | 99.6 | Plus |
3L | 28110227 | 3L | 258821..258998 | 293..470 | 890 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:39:11 has no hits.
BS27916.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-30 10:49:44 Download gff for
BS27916.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wac-RB | 82..532 | 17..467 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:27:59 Download gff for
BS27916.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wac-RB | 82..532 | 17..467 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:27:26 Download gff for
BS27916.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wac-RB | 82..532 | 17..467 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:27:26 Download gff for
BS27916.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 258823..258995 | 295..467 | 100 | | Plus |
3L | 258486..258763 | 17..294 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:27:59 Download gff for
BS27916.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 258823..258995 | 295..467 | 100 | | Plus |
arm_3L | 258486..258763 | 17..294 | 99 | -> | Plus |
BS27916.pep Sequence
Translation from 16 to 468
> BS27916.pep
MRLGQHFDDQLKLASVELGDFSDDDLALLDKCAQYYSLLHIHDINLNYLR
DFYCAKKRECIENRQTTVQQRVELQRILSSIEEATRDVVMLERFNAAAEE
RLIPDIVVMQRNAQQLATKQALLDRQKTLKIPKDFSIESVIEKVDSLEQR
*
BS27916.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:22:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
wac-PC | 150 | CG13879-PC | 1..150 | 1..150 | 751 | 100 | Plus |
wac-PD | 163 | CG13879-PD | 14..163 | 1..150 | 751 | 100 | Plus |
wac-PB | 163 | CG13879-PB | 14..163 | 1..150 | 751 | 100 | Plus |