BS27925.complete Sequence
1259 bp assembled on 2011-09-30
GenBank Submission: KX803122
> BS27925.complete
GAAGTTATCAGTCGACATGAGGCTGACGAACACTCTCTGTGCCCAGCACA
TCGGCTGGCATTTCAAGAAGCACTGGCTGGTCCAGGGTAGGCGAGTCCCC
AAGGAAACTGGCGCCGCGGCGGAGCTCCTGAAGCTAGGTGTTCTGGTGAA
GAATCCCGAGGATCTCTTGAACGCCAAAGTTGAAAAAAAACTAGTGGACA
TTGTTGGCGCACGCGAAAAACCCGTTCCCGAGGACAGCAGGCACCCTGAC
TGGCACCCCACAGTTTGCAACACTTACTCCGACAACAGCGTGCTAATTGG
TGGATTGCCGCAGGCCCAGGTGCTGACCAACTCCATTGTGATCCAAACAT
TTCCCAAGCACATCGAGGATGCCATTGCAAGTCAGCAGTTGCCAAATTCC
GTAGACAAGAGTGTCCGGCATGCGATTCTGGCATCCCACGTGCTTGATGC
AGAGCAAGTCAAGCTGCCCAAGGTGAGGCTACCGGAGAGGCCGGCCTTTA
ACCTGCCCCGCTCCTACGGAATATCACACGAAAGGGTCAACCGACTGTTG
GTAAACAAACTCCTGCATGAAAGTGAAAAACTGGCTGGCCGTTCAGTCTC
TGTTCGAAGGAAGCTGATAGACAACGCGTCTTTTAAGACTTTTTTAAGCA
AAGACGGGGATCTGCTAGGATTCTCAATCAATGCTGAAAAAGTGGTATTT
GCCAACCGAGCCATCGAAGGTGTTAAGGGAAAATTCGAAGGAGATCTGCC
TGATCTTTACCCCATGAAGAGTACTATATCGATTCCGAAGTACCACATTT
ACCAAGCTAAGAACTTGTATCCTTTGCGCTCGGACATCACCTGCTCCCAC
CCGCACACCATCTTTACGGTGTTTAACAAACACCAAGTCAAAAACTCCCA
CGGATCCGAGGTCACAACTTCTCAGCTTCAGGCGAGGACACTGGTCAAAG
CTTTCGTTGTGGCAGCCGCTCGAGCAAAGCAACTGCATGGGGATTCCGTA
GGAGCTCTTCCCAAACCAATTGTTGTGCAGAGCGTCCAGACTGACGGTAG
GACGTTCCACTTCGGAGTGTTGCAGCTGAATACCCTCGATCTTGGTGCCA
ATAGCACTGCCAAGAACTATTGGTTCCATAGGCAAAACTACAATCTGTTT
GCTGAATGCTCTTATGAAGGAGGGCGAACGCATTTGGATAATTACAATGG
CGAGGTCTTCCGCATATTTAATGCTTTCTATAACAATTCCTAAAAGCTTT
CTAGACCAT
BS27925.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:43:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL37-RB | 1227 | CG42632-PB | 1..1227 | 17..1243 | 6135 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:43:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL37-RB | 1356 | CG42632-RB | 84..1312 | 17..1245 | 6145 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:43:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10782607..10783030 | 1245..822 | 2120 | 100 | Minus |
| 3R | 32079331 | 3R | 10783424..10783771 | 540..193 | 1740 | 100 | Minus |
| 3R | 32079331 | 3R | 10783086..10783370 | 821..537 | 1410 | 99.6 | Minus |
| 3R | 32079331 | 3R | 10783834..10784009 | 192..17 | 880 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:43:56 has no hits.
BS27925.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-30 10:49:50 Download gff for
BS27925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL37-RB | 64..1288 | 17..1241 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:41:15 Download gff for
BS27925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL37-RB | 84..1308 | 17..1241 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:29:24 Download gff for
BS27925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL37-RB | 84..1308 | 17..1241 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:29:24 Download gff for
BS27925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10782611..10783030 | 822..1241 | 100 | <- | Minus |
| 3R | 10783086..10783366 | 541..821 | 100 | <- | Minus |
| 3R | 10783424..10783771 | 193..540 | 100 | <- | Minus |
| 3R | 10783834..10784009 | 17..192 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:41:15 Download gff for
BS27925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6609556..6609731 | 17..192 | 100 | | Minus |
| arm_3R | 6609146..6609493 | 193..540 | 100 | <- | Minus |
| arm_3R | 6608333..6608752 | 822..1241 | 100 | <- | Minus |
| arm_3R | 6608808..6609088 | 541..821 | 100 | <- | Minus |
BS27925.pep Sequence
Translation from 16 to 1242
> BS27925.pep
MRLTNTLCAQHIGWHFKKHWLVQGRRVPKETGAAAELLKLGVLVKNPEDL
LNAKVEKKLVDIVGAREKPVPEDSRHPDWHPTVCNTYSDNSVLIGGLPQA
QVLTNSIVIQTFPKHIEDAIASQQLPNSVDKSVRHAILASHVLDAEQVKL
PKVRLPERPAFNLPRSYGISHERVNRLLVNKLLHESEKLAGRSVSVRRKL
IDNASFKTFLSKDGDLLGFSINAEKVVFANRAIEGVKGKFEGDLPDLYPM
KSTISIPKYHIYQAKNLYPLRSDITCSHPHTIFTVFNKHQVKNSHGSEVT
TSQLQARTLVKAFVVAAARAKQLHGDSVGALPKPIVVQSVQTDGRTFHFG
VLQLNTLDLGANSTAKNYWFHRQNYNLFAECSYEGGRTHLDNYNGEVFRI
FNAFYNNS*
BS27925.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:23:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL37-PB | 408 | CG42632-PB | 1..408 | 1..408 | 2129 | 100 | Plus |
