BS27932.complete Sequence
686 bp assembled on 2011-09-30
GenBank Submission: KX802308
> BS27932.complete
GAAGTTATCAGTCGACATGTGGATCGCGAACGAACGCACTATCTGCGCAC
TGATGCCACTGGTGATTTTGGCGACCTGGCAGCTGTGCCTTCTTCCCGGG
ACGGATGCCAAGCACTTGGCCATCAGATTGCGCGACCCTCAAAGCGAAAT
CGAATCGGAAACGGTGCCCCTAGCCCATGTCCACAGCCACAGCCACACGG
ACGAGAGTGGCGTTCGCGGTGCTGCTGCAGTGCATCGTCGGGAGCGGCGG
CAACTCTCCGATTGGCTAATTGCGCCCAACACGCGGTGGTGCGGACGCGG
CAATCTGGCCAATGGAACGTACAACGATCTGGGCGGCGCTTCCAAGGCGG
ACAAATGCTGCCGGAAGCATGATCACTGCAAAATGTGGATCGATGGCATG
TCCAATCGCTATGATCTCTTCAACTATCGACCGTACACGCTGTCACACTG
CAGCTGTGATCTACGGTTCCGCACGTGTCTGAAGATGGCCGGCGACGAGG
ATGCGAACGCCATCGGAAAGCTCTTCTTCAATGTCGTGCAGACGCAGTGT
TTCGGCCTGAAGGCCGAGACCGTTTGCGTTCAGCGGGGCGGCTCCGGAAA
GGAGACCGATCCGTGCCTCAAGGAGGAGGTGCGTCACAAGGCCTTCCTGC
GCGACAACAAGCGGTTCTAAAAGCTTTCTAGACCAT
BS27932.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:24:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GIIIspla2-RC | 654 | CG1583-PC | 1..654 | 17..670 | 3270 | 100 | Plus |
| GIIIspla2-RB | 654 | CG1583-PB | 1..654 | 17..670 | 3270 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:24:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GIIIspla2-RC | 1543 | CG1583-RC | 97..750 | 17..670 | 3270 | 100 | Plus |
| GIIIspla2-RB | 1212 | CG1583-RB | 97..750 | 17..670 | 3270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:24:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8157724..8158377 | 17..670 | 3270 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:24:49 has no hits.
BS27932.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-30 10:49:25 Download gff for
BS27932.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GIIIspla2-RB | 71..722 | 17..668 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:08:23 Download gff for
BS27932.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GIIIspla2-RB | 97..748 | 17..668 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:21:09 Download gff for
BS27932.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GIIIspla2-RB | 97..748 | 17..668 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:21:09 Download gff for
BS27932.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8157724..8158375 | 17..668 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:08:23 Download gff for
BS27932.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8051757..8052408 | 17..668 | 100 | | Plus |
BS27932.pep Sequence
Translation from 16 to 669
> BS27932.pep
MWIANERTICALMPLVILATWQLCLLPGTDAKHLAIRLRDPQSEIESETV
PLAHVHSHSHTDESGVRGAAAVHRRERRQLSDWLIAPNTRWCGRGNLANG
TYNDLGGASKADKCCRKHDHCKMWIDGMSNRYDLFNYRPYTLSHCSCDLR
FRTCLKMAGDEDANAIGKLFFNVVQTQCFGLKAETVCVQRGGSGKETDPC
LKEEVRHKAFLRDNKRF*
BS27932.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:21:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GIIIspla2-PC | 217 | CG1583-PC | 1..217 | 1..217 | 1193 | 100 | Plus |
| GIIIspla2-PB | 217 | CG1583-PB | 1..217 | 1..217 | 1193 | 100 | Plus |
| CG3009-PD | 239 | CG3009-PD | 103..209 | 85..192 | 251 | 44.4 | Plus |
| CG3009-PB | 342 | CG3009-PB | 103..207 | 85..190 | 245 | 44.3 | Plus |
| CG3009-PA | 342 | CG3009-PA | 103..207 | 85..190 | 245 | 44.3 | Plus |
