BS27937.complete Sequence
1631 bp assembled on 2011-10-07
GenBank Submission: KX802008
> BS27937.complete
GAAGTTATCAGTCGACATGCTTGCCTCCCCGTCACCCTCGAAAAGCTCAC
TGTCCGCCTCGCGGGAGTACATTGATTTGGGCAGCAGCGGATCCCTGGAT
CGTTGCTCCGTCAATCAACCGGTTCCGGCAGCGAAGGACAAGGAGCCACA
TCAGCAGCTCTACGAGATTTGCCAGGGCCAGGGAGCGGGCCAGGACGAGG
ATGAGGCGCAACAGGCGATCACCTTTACCCACGAGGTGTTCATTGACTGC
CCGTATGCAGATCTGCCCGCTGGCCACTTGTCCCTGCAGAGGTCAACAAA
GTACGGACAGCTGCAGAGGATTGTGCCCAAGCGGCTGTTCTTCGACCAGA
CCCGCAAGTGCTACTGTGGCATCCTCAACGATTGGATGCTGTGCTATGCC
GACGGCCCGACCGCCTGTCGACCCAGCAGCACGCTCTACTTGAAGAGCTC
CTCCATCGAGATTGAACACTTCGGAGAGGGGAAGCGGCGCGACATCTGCT
TCCAGATCACAACAGACGACCCCAACAAGAAGTTCGTGTACCAGGCCAAC
AACGAAGTCGATGCCAAAGAGTGGATACACGCCATTGAGGCGGCCATCCG
CGGAGATGCTGGTGCTCATTCAGCGTTAAAGACTCCACCGCCCCGGAAAC
TGCCCACGCCGCCGGTCCAAAAGAAATCCACCTACACAGCAGCGGATATC
ATCTACGAGGAGCCCTCGCCCGTGTATGGTCTCATAGACTCCTCCTCCAT
GGTGCTCCCTAAGCTGCCGGAGAAAAGCAACAGCCCAAGCGCCCTCGCCC
GACGTTTCGAGTACGATGTGCCCAAATGCCCGGCACAGCCGCTGCAGGAC
ACCTCCTCCAGGGTGGCATCTGTAAGTGGGGAGCTGGAATCCCTGGGACT
ACTCAACGAGGGAGATATTAAGGTGCAACCGCAGCCTTCCAGTTTGCACG
GAAGCATATCGCTGGACTTCCAGGCCAGGGTGAAAACAGTGCACAGTGAG
CTCTCCACCCAGTTATCAGCGGCCGGTCCCAGTCCGGATCGTCTGAAAAA
GGCAGCGAAAAAGAGCTATTCGAATGGTAGTGAACCGGAGATGCTCTCTC
CCCTGACCAGCCCCGTCCAAACGCCCACCAAGGATCAGAAGAAGCAGCGC
AAGTCAACCACCTCACCGCAATCCAGTCCGGTCAGCAAGGACTGCGACAA
GCTGGCACGAAACTGGTTCCTCAGTCGCCTTAACAAGAGCACCGGATTGA
AGGCGACCAACACGGGCAGTGCATCACCAACCAACGCCAAGTGCAAGCAG
AGCGAGAAGGAGAACCTGCTGACGGAAGCGGAGCTGGGCGAGGGCTATGA
TGCAAGTCCTGGTGATCGGTATCACGGCCTGCCGGGCAGCCCGCCCACGT
CGCCGTGTCTGAAGGCGGAGGCCAAGAGCAAGGTGAACATGATTATCAAC
CAGTTTGAGAGTAGCGGTCACCTGTCCACCATGTTCAGCGTGGAAGCTTT
GGCCGCCAATGCACTCGCCTCGCTGACATCCTTCTGCGAAAGTGATGGTT
GCAACAACTACGAGCCAATCATGCCCCTGGCCACGACTCCCAGCAGCTTT
CTCAAGAAGGTGTAGAAGCTTTCTAGACCAT
BS27937.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:06:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| blow-RB | 1914 | CG1363-PB | 316..1914 | 17..1615 | 7995 | 100 | Plus |
| blow-RD | 1935 | CG1363-PD | 337..1935 | 17..1615 | 7995 | 100 | Plus |
| blow-RA | 1935 | CG1363-PA | 337..1935 | 17..1615 | 7995 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:06:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| blow-RB | 2270 | CG1363-RB | 370..1969 | 17..1616 | 8000 | 100 | Plus |
| blow-RD | 2612 | CG1363-RD | 712..2311 | 17..1616 | 8000 | 100 | Plus |
| blow-RA | 2632 | CG1363-RA | 732..2331 | 17..1616 | 8000 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:06:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7580789..7582354 | 1616..51 | 7830 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:06:30 has no hits.
BS27937.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-10-07 13:46:33 Download gff for
BS27937.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| blow-RB | 370..1968 | 17..1615 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:52:31 Download gff for
BS27937.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| blow-RA | 732..2330 | 17..1615 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:11:23 Download gff for
BS27937.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| blow-RA | 732..2330 | 17..1615 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:11:23 Download gff for
BS27937.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7580790..7582354 | 51..1615 | 100 | <- | Minus |
| 2R | 7582614..7582647 | 17..50 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:52:31 Download gff for
BS27937.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3468295..3469859 | 51..1615 | 100 | <- | Minus |
| arm_2R | 3470119..3470152 | 17..50 | 100 | | Minus |
BS27937.pep Sequence
Translation from 16 to 1614
> BS27937.pep
MLASPSPSKSSLSASREYIDLGSSGSLDRCSVNQPVPAAKDKEPHQQLYE
ICQGQGAGQDEDEAQQAITFTHEVFIDCPYADLPAGHLSLQRSTKYGQLQ
RIVPKRLFFDQTRKCYCGILNDWMLCYADGPTACRPSSTLYLKSSSIEIE
HFGEGKRRDICFQITTDDPNKKFVYQANNEVDAKEWIHAIEAAIRGDAGA
HSALKTPPPRKLPTPPVQKKSTYTAADIIYEEPSPVYGLIDSSSMVLPKL
PEKSNSPSALARRFEYDVPKCPAQPLQDTSSRVASVSGELESLGLLNEGD
IKVQPQPSSLHGSISLDFQARVKTVHSELSTQLSAAGPSPDRLKKAAKKS
YSNGSEPEMLSPLTSPVQTPTKDQKKQRKSTTSPQSSPVSKDCDKLARNW
FLSRLNKSTGLKATNTGSASPTNAKCKQSEKENLLTEAELGEGYDASPGD
RYHGLPGSPPTSPCLKAEAKSKVNMIINQFESSGHLSTMFSVEALAANAL
ASLTSFCESDGCNNYEPIMPLATTPSSFLKKV*
BS27937.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:27:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| blow-PB | 637 | CG1363-PB | 106..637 | 1..532 | 2773 | 100 | Plus |
| blow-PD | 644 | CG1363-PD | 113..644 | 1..532 | 2773 | 100 | Plus |
| blow-PA | 644 | CG1363-PA | 113..644 | 1..532 | 2773 | 100 | Plus |
