BS27963.complete Sequence
587 bp assembled on 2011-09-30
GenBank Submission: KX801567
> BS27963.complete
GAAGTTATCAGTCGACATGAGTTTGGTGTGGACTTTGATCGCCGGATTTC
TCTATGCGGAAATCGCACTGGTCCTTCTGCTGGTGCTGCCGGTGCTCACT
CCTTACCGCTGGAACCGGTTCTTCAAGTCCAAATTCCTATCGATGTTGGG
ACAACAGGCGCACATATATTTCCTGCTGATCATGGGAATTCTGGTCATTT
TCCTCCTGGAGGCCATTCGCGAGATGCGCAAGTACTCCGGCTTGCAGCAG
TCTAACGAGGTCCACTTGAACGTGGAGATGCAGCACAGCATGAAGCTGTT
CCGTGCCCAGCGGAACTTCTACATCTCTGGATTCGCCATTTTCCTTGCCC
TGGTCATCCGGCGACTGGTAAACTTGATCTGCACCCAGGCCAATCTCATG
GCCCAGAGCGAGGCTTCCTTCAAGCAGGCACAGAGCGCCACTGCAGCCGC
ACGTTCCTTGCTGGAGAACAAGAACACCGAGAAGGCCAAGGAAGCCGGCG
AGGATACCACTCTCATCGAGCTGTCAAGACTGCGGAGACGTGTGCAAGGA
CTCACCGCCCGAGTGTCCTAAAAGCTTTCTAGACCAT
BS27963.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:57:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13887-RD | 555 | CG13887-PD | 1..555 | 17..571 | 2775 | 100 | Plus |
| CG13887-RE | 687 | CG13887-PE | 1..506 | 17..522 | 2530 | 100 | Plus |
| CG13887-RB | 687 | CG13887-PB | 1..506 | 17..522 | 2530 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:57:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13887-RD | 1306 | CG13887-RD | 158..712 | 17..571 | 2775 | 100 | Plus |
| CG13887-RE | 1446 | CG13887-RE | 261..766 | 17..522 | 2530 | 100 | Plus |
| CG13887-RB | 1262 | CG13887-RB | 261..766 | 17..522 | 2530 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:57:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 838121..838624 | 17..520 | 2520 | 100 | Plus |
| 3L | 28110227 | 3L | 839101..839153 | 519..571 | 265 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:57:08 has no hits.
BS27963.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-30 10:50:02 Download gff for
BS27963.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13887-RD | 162..714 | 17..569 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:50:11 Download gff for
BS27963.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13887-RD | 158..710 | 17..569 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:34:59 Download gff for
BS27963.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13887-RD | 158..710 | 17..569 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:34:59 Download gff for
BS27963.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 838121..838624 | 17..520 | 100 | -> | Plus |
| 3L | 839103..839151 | 521..569 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:50:11 Download gff for
BS27963.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 838121..838624 | 17..520 | 100 | -> | Plus |
| arm_3L | 839103..839151 | 521..569 | 100 | | Plus |
BS27963.pep Sequence
Translation from 16 to 570
> BS27963.pep
MSLVWTLIAGFLYAEIALVLLLVLPVLTPYRWNRFFKSKFLSMLGQQAHI
YFLLIMGILVIFLLEAIREMRKYSGLQQSNEVHLNVEMQHSMKLFRAQRN
FYISGFAIFLALVIRRLVNLICTQANLMAQSEASFKQAQSATAAARSLLE
NKNTEKAKEAGEDTTLIELSRLRRRVQGLTARVS*
BS27963.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:24:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13887-PD | 184 | CG13887-PD | 1..184 | 1..184 | 901 | 100 | Plus |
| CG13887-PE | 228 | CG13887-PE | 1..181 | 1..181 | 866 | 97.2 | Plus |
| CG13887-PB | 228 | CG13887-PB | 1..181 | 1..181 | 866 | 97.2 | Plus |
| CG13887-PC | 228 | CG13887-PC | 1..181 | 1..181 | 866 | 97.2 | Plus |
