BS27964.complete Sequence
479 bp assembled on 2011-09-30
GenBank Submission: KX801563
> BS27964.complete
GAAGTTATCAGTCGACATGAATAAAGAAGCAACGAAAAGGCGGCGCCAGA
GGTGCACCGAATCACTCAAGGATATATTGTCAAATCTGCGCATTCGTAAC
AGAAAGGCCTGGTTCAATTATGTAGACAAGACTAAATCGCCACATATAAG
AAATTTGTTGGCCAAAGAATCGTATAAAAAATTAAAAAATGCTTCCAAAA
CTTCAGGTAAGGAAAAAAGAAAGATTGAAAAATTGCAACGTTCTTTAAAA
AAAATGATGAAGCAAGAGTTACAAAAACAGGTGATTTACCTAAAGAATAT
TTGGGTGTCCTTAGCACATGTCCTTGCACTACTTTTCGATCAAGGACCTA
TTGAGCAAATCAGCAGCCTGGTATTCACTATATTCACTATAACTAAATCT
TTGGTAGTTGGCATTAAGTATAAAACCAAAATGGAAGATTTCGCCGAGCA
TCACAGCGAATGAAAGCTTTCTAGACCAT
BS27964.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:57:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42692-RB | 447 | CG42692-PB | 1..447 | 17..463 | 2235 | 100 | Plus |
| CG42692-RA | 387 | CG42692-PA | 189..387 | 265..463 | 995 | 100 | Plus |
| CG42692-RA | 387 | CG42692-PA | 1..190 | 17..206 | 950 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:58:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42692-RB | 642 | CG42692-RB | 89..540 | 17..468 | 2245 | 99.8 | Plus |
| CG42692-RA | 603 | CG42692-RA | 277..480 | 265..468 | 1005 | 99.5 | Plus |
| CG42692-RA | 603 | CG42692-RA | 89..278 | 17..206 | 950 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:57:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 14008364..14008697 | 135..468 | 1655 | 99.7 | Plus |
| 2L | 23513712 | 2L | 14008189..14008306 | 17..134 | 590 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 10:57:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dbuz\BuT5 | 669 | Dbuz\BuT5 BUT5 669bp | 493..557 | 208..143 | 111 | 65.2 | Minus |
BS27964.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-30 10:50:03 Download gff for
BS27964.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42692-RB | 63..508 | 17..462 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:52:44 Download gff for
BS27964.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42692-RB | 89..534 | 17..462 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:35:21 Download gff for
BS27964.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42692-RB | 89..534 | 17..462 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:35:21 Download gff for
BS27964.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 14008189..14008306 | 17..134 | 100 | -> | Plus |
| 2L | 14008364..14008691 | 135..462 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:52:44 Download gff for
BS27964.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 14008189..14008306 | 17..134 | 100 | -> | Plus |
| arm_2L | 14008364..14008691 | 135..462 | 100 | | Plus |
BS27964.pep Sequence
Translation from 16 to 462
> BS27964.pep
MNKEATKRRRQRCTESLKDILSNLRIRNRKAWFNYVDKTKSPHIRNLLAK
ESYKKLKNASKTSGKEKRKIEKLQRSLKKMMKQELQKQVIYLKNIWVSLA
HVLALLFDQGPIEQISSLVFTIFTITKSLVVGIKYKTKMEDFAEHHSE*
BS27964.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:24:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42692-PB | 148 | CG42692-PB | 1..148 | 1..148 | 746 | 100 | Plus |
| CG42692-PA | 128 | CG42692-PA | 1..128 | 1..148 | 618 | 86.5 | Plus |
