BS27975.complete Sequence
797 bp assembled on 2011-10-04
GenBank Submission: KX804301
> BS27975.complete
GAAGTTATCAGTCGACATGAATAATGGGAATATAAAACGCCTTCAAAAGA
AACTCAGCGTTTCGAAAAAGCCAGCAGTCACTGTGGATTCACCATTGGCA
AAGTATGACTCCTCGGGCATCTTGACCTGCATTATTTGCAGGATTCCTAT
CAAACCCAACGTCTGGAAGGTGCATATAAATTCCAAGCAGCACAAACTGA
ACGTCGATCAGGCTAAGCAGAATAAGGTGGAGAAACCCGTCACCACTACT
GCACCCAAGGATCCTACGGGTCCGTCCACCAAGACTTCAGCTCCTGCCAA
AAACTCCAGCACACTGCCAGATAAAACTCCACAGAGCAGCCAGGAAAAGC
ATCCTCCCCTCATTCAAGAGAAAACTGCCCAGGGAAATGCGAGCAGCAAG
CCTGAGAATGAAACTACTGTCGAGAAACTGCCAGAAAAGTTCTTCGACGA
GGATAAGACCAATAAATCGGAGGCCGCTCGCCTTCAGGACGAGGAATGGC
AGCGATTCCAGCAGGAGATCAAGCGGGCGGACACGGAATCCAGTGAAATT
GTGGCCGACGAGCAGGAGGACATCAATCTCAAGCGACACATCAAGGAGAT
CGACGAGCAGATCGACAACTGGAAGAGATTTATTAAAATTAACGATCAGA
AAAAAGTACTCCTTAGTAAAAAGCGAAGAGTAGACCCCAAGATGGAGGTC
GATCCGGAATTGAGTTCAAGCGAAGAAGATTGCAGTGTGGATGATTTGTT
CGACTGGAGAACGAAAAATCTGCATAGCTAGAAGCTTTCTAGACCAT
BS27975.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:28:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11839-RB | 765 | CG11839-PB | 1..765 | 17..781 | 3825 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:28:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11839-RB | 836 | CG11839-RB | 37..804 | 15..782 | 3840 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:28:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25070203..25070882 | 103..782 | 3400 | 100 | Plus |
| 3R | 32079331 | 3R | 25069963..25070054 | 15..106 | 445 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:28:12 has no hits.
BS27975.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-10-04 16:08:31 Download gff for
BS27975.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11839-RB | 39..803 | 17..781 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 12:48:31 Download gff for
BS27975.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11839-RB | 39..803 | 17..781 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:19:06 Download gff for
BS27975.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11839-RB | 39..803 | 17..781 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:19:06 Download gff for
BS27975.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25069965..25070050 | 17..102 | 100 | <- | Plus |
| 3R | 25070203..25070881 | 103..781 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 12:48:31 Download gff for
BS27975.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20895687..20895772 | 17..102 | 100 | <- | Plus |
| arm_3R | 20895925..20896603 | 103..781 | 100 | | Plus |
BS27975.pep Sequence
Translation from 16 to 780
> BS27975.pep
MNNGNIKRLQKKLSVSKKPAVTVDSPLAKYDSSGILTCIICRIPIKPNVW
KVHINSKQHKLNVDQAKQNKVEKPVTTTAPKDPTGPSTKTSAPAKNSSTL
PDKTPQSSQEKHPPLIQEKTAQGNASSKPENETTVEKLPEKFFDEDKTNK
SEAARLQDEEWQRFQQEIKRADTESSEIVADEQEDINLKRHIKEIDEQID
NWKRFIKINDQKKVLLSKKRRVDPKMEVDPELSSSEEDCSVDDLFDWRTK
NLHS*
BS27975.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:26:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11839-PB | 254 | CG11839-PB | 1..254 | 1..254 | 1321 | 100 | Plus |
