BS27982.complete Sequence
335 bp assembled on 2011-09-30
GenBank Submission: KX801770
> BS27982.complete
GAAGTTATCAGTCGACATGGAGGTTCTTTGGCTGCTTCTTTTGGTATCGC
ATCTGAGTTCAACGCAGGGCGAGGGAAACTGTACCACCTGTGCTGCTTGG
GTCGAGCGTGCGGTATGTGGCTATAATAATAGATGCTTTACGAGTTTCAA
GAGCACCTGCGAAATGGAAATGATCAATTGCAAACTACCGGACGTCTACA
AATTCAAAGAAACACCTTATTATGGACACTGCTTTAGATCCACCATACAA
AAGTGCAAGGCCTATGTCCTGTTGCAGCAGCTGAACAAAAAGGACAACTC
CGTTGAAATGTTCGCTTAGAAGCTTTCTAGACCAT
BS27982.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:32:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42789-RC | 150 | CG42789-PC | 1..150 | 170..319 | 750 | 100 | Plus |
CG42789-RB | 150 | CG42789-PB | 1..150 | 170..319 | 750 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:32:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42789-RC | 484 | CG42789-RC | 21..324 | 16..319 | 1520 | 100 | Plus |
CG42789-RB | 392 | CG42789-RB | 49..301 | 67..319 | 1265 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:32:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 26783951..26784107 | 200..44 | 785 | 100 | Minus |
3R | 32079331 | 3R | 26783769..26783887 | 319..201 | 595 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:32:06 has no hits.
BS27982.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-30 10:49:32 Download gff for
BS27982.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42789-RA | 22..324 | 17..319 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:12:28 Download gff for
BS27982.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42789-RC | 22..324 | 17..319 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:24:24 Download gff for
BS27982.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42789-RC | 22..324 | 17..319 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:24:24 Download gff for
BS27982.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 26783769..26783887 | 201..319 | 100 | <- | Minus |
3R | 26783951..26784106 | 45..200 | 100 | <- | Minus |
3R | 26784160..26784187 | 17..44 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:12:28 Download gff for
BS27982.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 22609491..22609609 | 201..319 | 100 | <- | Minus |
arm_3R | 22609673..22609828 | 45..200 | 100 | <- | Minus |
arm_3R | 22609882..22609909 | 17..44 | 100 | | Minus |
BS27982.pep Sequence
Translation from 16 to 318
> BS27982.pep
MEVLWLLLLVSHLSSTQGEGNCTTCAAWVERAVCGYNNRCFTSFKSTCEM
EMINCKLPDVYKFKETPYYGHCFRSTIQKCKAYVLLQQLNKKDNSVEMFA
*
BS27982.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:22:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42789-PC | 49 | CG42789-PC | 1..49 | 52..100 | 268 | 100 | Plus |
CG42789-PB | 49 | CG42789-PB | 1..49 | 52..100 | 268 | 100 | Plus |