BS27991.complete Sequence
323 bp assembled on 2011-09-30
GenBank Submission: KX802439
> BS27991.complete
GAAGTTATCAGTCGACATGCGGAATAGCACTTTGATTCTCATCGCCGTCG
TTATGACTGTTTGCATTTTTGCGAATGTAACTGGAGTAACTCGATGCAAG
GGAAAGCCCAAGGATTCAAAGTGTGCCGGGAATCTCGATGGCGGTAACAA
TCGCAAAAGCAAATGCAAGAAATCGGCCAACAAAAATATGTGGCACTACA
ATACACGGACAAAAAACTGCACACAATTCAACTACCTAGGATGTGGTGGC
AATAATAATCGCTGGTGCACAAAAGCATTATGTGAAGCCTGTCGACGACC
AAGATAAAAGCTTTCTAGACCAT
BS27991.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:25:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42717-RA | 291 | CG42717-PA | 1..291 | 17..307 | 1455 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:25:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42717-RA | 373 | CG42717-RA | 34..326 | 17..309 | 1465 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:25:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16032809..16033007 | 309..111 | 995 | 100 | Minus |
3L | 28110227 | 3L | 16033064..16033157 | 110..17 | 470 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:25:06 has no hits.
BS27991.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-30 10:49:27 Download gff for
BS27991.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42717-RA | 25..313 | 17..305 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:08:32 Download gff for
BS27991.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42717-RA | 34..322 | 17..305 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:21:18 Download gff for
BS27991.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42717-RA | 34..322 | 17..305 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:21:18 Download gff for
BS27991.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16032813..16033007 | 111..305 | 100 | <- | Minus |
3L | 16033064..16033157 | 17..110 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:08:32 Download gff for
BS27991.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16025913..16026107 | 111..305 | 100 | <- | Minus |
arm_3L | 16026164..16026257 | 17..110 | 100 | | Minus |
BS27991.pep Sequence
Translation from 16 to 306
> BS27991.pep
MRNSTLILIAVVMTVCIFANVTGVTRCKGKPKDSKCAGNLDGGNNRKSKC
KKSANKNMWHYNTRTKNCTQFNYLGCGGNNNRWCTKALCEACRRPR*
BS27991.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:21:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42717-PA | 96 | CG42717-PA | 1..96 | 1..96 | 541 | 100 | Plus |
CG42538-PA | 89 | CG42538-PA | 4..89 | 11..94 | 183 | 37.2 | Plus |
CG42713-PA | 92 | CG42713-PA | 4..85 | 9..90 | 171 | 32.9 | Plus |
CG42713-PB | 92 | CG42713-PB | 4..85 | 9..90 | 171 | 32.9 | Plus |
CG42537-PA | 90 | CG42537-PA | 5..86 | 6..90 | 167 | 38.4 | Plus |