BS27992.complete Sequence
503 bp assembled on 2011-09-30
GenBank Submission: KX805084
> BS27992.complete
GAAGTTATCAGTCGACATGCAGCAATCTTTGCGCGTGGAACTGCTATTGA
TCGTTTACGGGTTGATTCTCGTTGTCTGGGGAATCAATGGATTAAACATA
CCCGAGTGCAGTGGCCAGAATGGATTTATTAACAATACGCGATCCAATTG
CAATTACTCCCTCATCAATTGCTCTGGCCAGAACTCGATGTTCTGCACGG
ACAACACGACCTGCAATGCCAACTTCACCTGTAGCGACATACTTCCGGTG
GATAATTCAACAGCACTACCCATAAGCACAACTCCCAATGTGGTAACCAC
AGCCTCGACAACTGTTTCACCTTCCGATATTCGACGAGAGTGTCGTCAGG
GTGTTACCAAAAGATTTAGCTATCCGCAGAATTGTAACTACTTCTACTAT
TGCGTTGATGGCTTTCTGCTGGTGGAGCAATGTCCTATTGGCTACGCATT
CGATCCCCAAACTGGAGCTTGTGGTGGACGTACGTAAAAGCTTTCTAGAC
CAT
BS27992.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:25:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42728-RA | 471 | CG42728-PA | 1..471 | 17..487 | 2355 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:25:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42728-RA | 577 | CG42728-RA | 16..486 | 17..487 | 2355 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:25:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15527711..15528181 | 487..17 | 2355 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:25:39 has no hits.
BS27992.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-30 10:49:29 Download gff for
BS27992.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42728-RA | 16..484 | 17..485 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:08:44 Download gff for
BS27992.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42728-RA | 16..484 | 17..485 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:21:34 Download gff for
BS27992.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42728-RA | 16..484 | 17..485 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:21:34 Download gff for
BS27992.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15527713..15528181 | 17..485 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:08:44 Download gff for
BS27992.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15520813..15521281 | 17..485 | 100 | | Minus |
BS27992.pep Sequence
Translation from 16 to 486
> BS27992.pep
MQQSLRVELLLIVYGLILVVWGINGLNIPECSGQNGFINNTRSNCNYSLI
NCSGQNSMFCTDNTTCNANFTCSDILPVDNSTALPISTTPNVVTTASTTV
SPSDIRRECRQGVTKRFSYPQNCNYFYYCVDGFLLVEQCPIGYAFDPQTG
ACGGRT*
BS27992.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:21:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42728-PA | 156 | CG42728-PA | 1..156 | 1..156 | 850 | 100 | Plus |
CG42729-PA | 185 | CG42729-PA | 4..172 | 10..152 | 163 | 28.2 | Plus |