BS27994.complete Sequence
299 bp assembled on 2011-10-04
GenBank Submission: KX805985
> BS27994.complete
GAAGTTATCAGTCGACATGTCTCCTAAGTTCGCACTTGCAGTTCTGCTCC
TCAGCTGCGTTCTCCTAGGACTGGCCAATGCCCAGTATAACAGGCGCTAT
CAGACTGGGCCTAACCGACAAAAAATTGGGACTCGAATGAATGCGGACGG
CCCTTTGCCGCCAAATTTCCCCCCTCCGGCTGATAATGCTGGTGGCAGTG
ATGTCCCGGCCAACGTGGATTGCATGCCCAATCTATTGGCTAGTAACACC
CTTGATACCAGGAAACCTAGGCCCAAGCATTAAAAGCTTTCTAGACCAT
BS27994.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:27:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42792-RA | 267 | CG42792-PA | 1..267 | 17..283 | 1335 | 100 | Plus |
| CG42792-RB | 267 | CG42792-PB | 1..267 | 17..283 | 1335 | 100 | Plus |
| CG44475-RA | 246 | CG44475-PA | 1..246 | 17..283 | 775 | 86.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:27:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42792-RA | 397 | CG42792-RA | 7..275 | 17..285 | 1345 | 100 | Plus |
| CG42792-RB | 468 | CG42792-RB | 39..307 | 17..285 | 1345 | 100 | Plus |
| CG44475-RA | 343 | CG44475-RA | 18..263 | 17..283 | 775 | 86.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:27:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15865090..15865250 | 285..125 | 805 | 100 | Minus |
| 2L | 23513712 | 2L | 15865316..15865423 | 124..17 | 540 | 100 | Minus |
| 2L | 23513712 | 2L | 15882863..15882974 | 283..172 | 455 | 93.8 | Minus |
| 2L | 23513712 | 2L | 15883066..15883173 | 124..17 | 435 | 93.5 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:27:25 has no hits.
BS27994.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-10-04 15:39:38 Download gff for
BS27994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42792-RA | 1..265 | 17..281 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 12:44:59 Download gff for
BS27994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42792-RA | 7..271 | 17..281 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:18:46 Download gff for
BS27994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42792-RB | 39..303 | 17..281 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:18:46 Download gff for
BS27994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15865094..15865250 | 125..281 | 100 | <- | Minus |
| 2L | 15865316..15865423 | 17..124 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 12:44:59 Download gff for
BS27994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15865094..15865250 | 125..281 | 100 | <- | Minus |
| arm_2L | 15865316..15865423 | 17..124 | 100 | | Minus |
BS27994.pep Sequence
Translation from 16 to 282
> BS27994.pep
MSPKFALAVLLLSCVLLGLANAQYNRRYQTGPNRQKIGTRMNADGPLPPN
FPPPADNAGGSDVPANVDCMPNLLASNTLDTRKPRPKH*
BS27994.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:26:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42792-PA | 88 | CG42792-PA | 1..88 | 1..88 | 472 | 100 | Plus |
| CG42792-PB | 88 | CG42792-PB | 1..88 | 1..88 | 472 | 100 | Plus |
| CG44475-PA | 81 | CG44475-PA | 1..81 | 1..88 | 382 | 85.2 | Plus |
