BS28085.complete Sequence
2354 bp assembled on 2011-12-14
GenBank Submission: KX800243
> BS28085.complete
GAAGTTATCAGTCGACATGACCCTGACCACAACGACCACTGCCTCATCAG
CCGAGAGCCAAGCGAAAATGGACGTAAAGGGCGGCGCACTTCCCGGCGAA
GAGAACCTGCCCACATCCGAAATGGATCTGCTGGCCAAACTGGAGGCGGC
CAATAAGCTCATCGAGAGCGATGCCAAGTCCCTCAACTCTCTGCATTCCA
CGCACAGTCGCAAGAACTCGGATACGAGTCAAATCAGTCTTACGTCGAGT
GGAAATTCGGTGGCCGAAGAGGACATCTGGACGACGTGGGCCACCATCCT
CAATGACTGGGAGGGAGCACTGAAACGAAAGAATCCCTGCGTCAGTGAGC
TGGTGCGCCGTGGAATTCCACACCACTTCCGAGCGATCGTATGGCAGCAG
CTAAGTGGAGCGTCCGACGGCGACAAAAAACAGTATGCGGAGTACATCAA
GGCGACCAGTGCCTGCGAGAAGGTCATACGGCGTGACATTGCCCGCACCT
ATCCCGAGGTGGAGTTCTTCAAGGAGAAGGATGGACCCGGACAGGAGGCC
CTGTTCAATGTGATCAAGGCATATTCTCTGCACGATCGCGAGGTCGGCTA
CTGCCAGGGCTCGGGATTCATTGTGGGCCTGCTGCTGATGCAAATGCCCG
AGGAGGAGGCATTCGCTGTGCTCGTGCAGATCATGCAGCAGCATCGGATG
CGGCACATGTTTAAGCCCTCCATGTCGGAGTTGGGCTTGTGCATGTACCA
GCTGGAGAATCTGGTGCAGGAGCAAATACCCGACATGCACATTCACTTCC
AGCAGCAGGGCTTCCAGACGACCATGTACGCCTCCAGTTGGTTCCTCACC
CTATACACGACCACTCTGAATGTCAATCTAAGTTGTCGCATCATGGACGT
CTTCCTCAGCGAGGGCATGGAGTTCATCTTTAAGGTGGCCTTGGCCCTGC
TGCTCACCGGCAAGGATACGTTGCTCTGCCTGGACATGGAGGCCATGCTT
AAGTTCTTCCAAAAGGAGCTGCCCGGTCGCGTGGAGGCGGATGTCGAGGG
CTTCTTCAATCTAGCCTACTCCATAAAGCTGAATACTAAGCGTATGAAGA
AGATGGAAAAGGAGTACCAGGACCTCAAGAAGAAGGAGCAGGAGGAGATG
GCCGAGCTGCGGCGACTGAGACGCGAGAACTGCCTGCTGAAGCAGCGCAA
CGAGCTGCTGGAGGCCGAGAGTGCCGAACTGGCCGATCGCCTGGTCCGTG
GTCAGGTCTCCCGAGCTGAGGAGGAGGAAACTAGCTATGCCATTCAGACG
GAGCTAATGCAGCTGCGCCGATCATACTTGGAGGTCTCGCATCAGCTGGA
AAACGCCAACGAGGAGGTGCGCGGCCTGAGTCTACGGCTGCAGGAGAATA
ATAACTCCCGGCAATCGTCCATTGACGAGCTCTGCATGAAGGAGGAGGCG
CTGAAGCAGCGCGACGAGATGGTCTCCTGTTTGCTGGAGGAACTGGTGAA
GGTGCGTCAGGGACTGGCCGAAAGCGAGGATCAGATCAGGAACCTCAAGG
CCAAGGTCGAGGAGCTGGAGGAGGATAAGAAGACGCTGCGGGAAACGACG
CCAGACAATTCGGTGGCTCATCTGCAGGATGAACTGATTGCTAGTAAACT
TCGCGAGGCTGAGGCCTCACTTTCGCTAAAGGATCTCAAGCAGAGGGTGC
AGGAGCTGAGCAGCCAGTGGCAGCGTCAATTGGCCGAGAATCAGCGCAGC
GAAAGCGAACGCACCACCAACGCTGTGGACTCTACGCCCAAAAAGCTGTT
GACCAACTTCTTTGACAGCTCCAAGAGTAGCGAGCACACGCAGAAGCTCG
AGGAGGAGCTGATGACCACGCGCATACGCGAGATGGAGACGCTTACCGAG
CTCAAGGAGCTGCGACTTAAGGTCATGGAGCTGGAGACGCAGGTCCAGGT
GTCCACCAATCAGCTGAGGCGGCAGGACGAGGAGCACAAGAAGCTCAAGG
AGGAGCTCGAAATGGCCGTGACCCGGGAGAAGGACATGTCCAACAAGGCG
CGTGAACAGCAACACAGATACTCGGATCTGGAATCTCGCATGAAGGATGA
GCTGATGAATGTGAAAATCAAATTCACCGAGCAAAGCCAAACGGTGGCTG
AACTGAAACAGGAAATTTCCCGTCTTGAGACCAAGAACTCGGAAATGCTC
GCCGAGGGCGAACTGCGCGCGAATCTGGATGATTCGGACAAGGTGCGCGA
CCTGCAGGACAGGCTGGCCGACATGAAGGCGGAGTATCCCACGCCAATAA
CCAGCCCCGACACTGAGCCGTGGAAATGGATAAGCTAAAAGCTTTCTAGA
CCAT
BS28085.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:58:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Evi5-RC | 2322 | CG11727-PC | 1..2322 | 17..2338 | 11610 | 100 | Plus |
| Evi5-RE | 2322 | CG11727-PE | 1..2322 | 17..2338 | 11610 | 100 | Plus |
| Evi5-RB | 2340 | CG11727-PB | 1..2340 | 17..2338 | 11395 | 99.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:58:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Evi5-RC | 3159 | CG11727-RC | 756..3078 | 17..2339 | 11615 | 100 | Plus |
| Evi5-RE | 5423 | CG48-RE | 756..3078 | 17..2339 | 11615 | 100 | Plus |
| Evi5-RB | 3177 | CG11727-RB | 756..3096 | 17..2339 | 11400 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:58:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11437194..11438239 | 1294..249 | 5185 | 99.7 | Minus |
| X | 23542271 | X | 11435729..11436396 | 2067..1400 | 3340 | 100 | Minus |
| X | 23542271 | X | 11438661..11438894 | 250..17 | 1170 | 100 | Minus |
| X | 23542271 | X | 11435549..11435668 | 2185..2066 | 600 | 100 | Minus |
| X | 23542271 | X | 11437023..11437139 | 1399..1283 | 585 | 100 | Minus |
| X | 23542271 | X | 11435383..11435483 | 2284..2184 | 505 | 100 | Minus |
| X | 23542271 | X | 11434760..11434816 | 2339..2283 | 285 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 07:58:42 has no hits.
BS28085.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-14 10:03:49 Download gff for
BS28085.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11727-RC | 720..3039 | 17..2336 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:21 Download gff for
BS28085.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Evi5-RE | 756..3075 | 17..2336 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:08:17 Download gff for
BS28085.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Evi5-RE | 756..3075 | 17..2336 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:08:17 Download gff for
BS28085.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11434763..11434814 | 2285..2336 | 100 | <- | Minus |
| X | 11435383..11435481 | 2186..2284 | 100 | <- | Minus |
| X | 11435549..11435666 | 2068..2185 | 100 | <- | Minus |
| X | 11435729..11436396 | 1400..2067 | 100 | <- | Minus |
| X | 11437023..11437137 | 1285..1399 | 100 | <- | Minus |
| X | 11437204..11438239 | 249..1284 | 100 | <- | Minus |
| X | 11438663..11438894 | 17..248 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:21 Download gff for
BS28085.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11328796..11328847 | 2285..2336 | 100 | <- | Minus |
| arm_X | 11329416..11329514 | 2186..2284 | 100 | <- | Minus |
| arm_X | 11329582..11329699 | 2068..2185 | 100 | <- | Minus |
| arm_X | 11329762..11330429 | 1400..2067 | 100 | <- | Minus |
| arm_X | 11331056..11331170 | 1285..1399 | 100 | <- | Minus |
| arm_X | 11331237..11332272 | 249..1284 | 100 | <- | Minus |
| arm_X | 11332696..11332927 | 17..248 | 100 | | Minus |
BS28085.pep Sequence
Translation from 16 to 2337
> BS28085.pep
MTLTTTTTASSAESQAKMDVKGGALPGEENLPTSEMDLLAKLEAANKLIE
SDAKSLNSLHSTHSRKNSDTSQISLTSSGNSVAEEDIWTTWATILNDWEG
ALKRKNPCVSELVRRGIPHHFRAIVWQQLSGASDGDKKQYAEYIKATSAC
EKVIRRDIARTYPEVEFFKEKDGPGQEALFNVIKAYSLHDREVGYCQGSG
FIVGLLLMQMPEEEAFAVLVQIMQQHRMRHMFKPSMSELGLCMYQLENLV
QEQIPDMHIHFQQQGFQTTMYASSWFLTLYTTTLNVNLSCRIMDVFLSEG
MEFIFKVALALLLTGKDTLLCLDMEAMLKFFQKELPGRVEADVEGFFNLA
YSIKLNTKRMKKMEKEYQDLKKKEQEEMAELRRLRRENCLLKQRNELLEA
ESAELADRLVRGQVSRAEEEETSYAIQTELMQLRRSYLEVSHQLENANEE
VRGLSLRLQENNNSRQSSIDELCMKEEALKQRDEMVSCLLEELVKVRQGL
AESEDQIRNLKAKVEELEEDKKTLRETTPDNSVAHLQDELIASKLREAEA
SLSLKDLKQRVQELSSQWQRQLAENQRSESERTTNAVDSTPKKLLTNFFD
SSKSSEHTQKLEEELMTTRIREMETLTELKELRLKVMELETQVQVSTNQL
RRQDEEHKKLKEELEMAVTREKDMSNKAREQQHRYSDLESRMKDELMNVK
IKFTEQSQTVAELKQEISRLETKNSEMLAEGELRANLDDSDKVRDLQDRL
ADMKAEYPTPITSPDTEPWKWIS*
BS28085.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:40:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Evi5-PC | 773 | CG11727-PC | 1..773 | 1..773 | 3895 | 100 | Plus |
| Evi5-PE | 773 | CG11727-PE | 1..773 | 1..773 | 3895 | 100 | Plus |
| Evi5-PB | 779 | CG11727-PB | 1..779 | 1..773 | 3878 | 99.2 | Plus |
| Evi5-PD | 801 | CG11727-PD | 1..756 | 1..756 | 3791 | 100 | Plus |
| Evi5-PA | 807 | CG11727-PA | 1..762 | 1..756 | 3774 | 99.2 | Plus |
