BS28107.complete Sequence
449 bp assembled on 2012-03-05
GenBank Submission: KX804926
> BS28107.complete
GAAGTTATCAGTCGACATGGCATTTTGCATAGCAGTTATTGGCAAGGATA
ACGCCCCCCTGTACCTGACCACATCCGATATGGAGCAGGAACTGGAATTG
CAATATCATGTTAACGCCGCCTTAGACGTCGTGGAGGAGAAGTGCCTGAT
TGGCAAGGGTGCTCCGGAGTCCAAGGAGCTGTACCTGGGACTGCTCTACT
CGACAGAGAACCACAAAATATACGGCTTTGTGACCAACACTCGGGTGAAA
TTCATAGTGGTCATCGACTCCAGCAACGTTGCCCTTCGGGAAAACGAAGT
TCGAGCAATCTTCCGAAATCTCCACTTGCTCTACACCGATGCCATCTGCA
ATCCCTTTTACATTCCCGGCGAATCGCTGACTTCAAAGAAGTTCGATCGC
GCTGTCCAGAAACTGATGAGCGGCACTGCCTAGAAGCTTTCTAGACCAT
BS28107.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:25:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9067-RA | 417 | CG9067-PA | 1..417 | 17..433 | 2085 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:25:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9067-RA | 548 | CG9067-RA | 89..505 | 17..433 | 2085 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:25:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11279335..11279508 | 223..50 | 855 | 99.4 | Minus |
| 2R | 25286936 | 2R | 11279191..11279278 | 307..220 | 440 | 100 | Minus |
| 2R | 25286936 | 2R | 11279045..11279125 | 388..308 | 405 | 100 | Minus |
| 2R | 25286936 | 2R | 11278936..11278981 | 433..388 | 230 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:25:42 has no hits.
BS28107.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:19 Download gff for
BS28107.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9067-RA | 7..423 | 17..433 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:39 Download gff for
BS28107.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9067-RA | 89..505 | 17..433 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:18:02 Download gff for
BS28107.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9067-RA | 89..505 | 17..433 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:18:02 Download gff for
BS28107.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11278936..11278981 | 388..433 | 100 | <- | Minus |
| 2R | 11279046..11279125 | 308..387 | 100 | <- | Minus |
| 2R | 11279191..11279278 | 220..307 | 100 | <- | Minus |
| 2R | 11279339..11279508 | 50..219 | 100 | <- | Minus |
| 2R | 11279563..11279595 | 17..49 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:39 Download gff for
BS28107.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7166441..7166486 | 388..433 | 100 | <- | Minus |
| arm_2R | 7166551..7166630 | 308..387 | 100 | <- | Minus |
| arm_2R | 7166696..7166783 | 220..307 | 100 | <- | Minus |
| arm_2R | 7166844..7167013 | 50..219 | 100 | <- | Minus |
| arm_2R | 7167068..7167100 | 17..49 | 100 | | Minus |
BS28107.pep Sequence
Translation from 16 to 432
> BS28107.pep
MAFCIAVIGKDNAPLYLTTSDMEQELELQYHVNAALDVVEEKCLIGKGAP
ESKELYLGLLYSTENHKIYGFVTNTRVKFIVVIDSSNVALRENEVRAIFR
NLHLLYTDAICNPFYIPGESLTSKKFDRAVQKLMSGTA*
BS28107.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:48:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9067-PA | 138 | CG9067-PA | 1..138 | 1..138 | 705 | 100 | Plus |
