BS28115.complete Sequence
461 bp assembled on 2012-03-05
GenBank Submission: KX801101
> BS28115.complete
GAAGTTATCAGTCGACATGTTCAATATTATCCTTCTGGCAACAATCCTAG
TGAGCGTGGCTCAGGCCACAATCATCATTAAGCCCGAAAATCCCGTGGAG
GAGACCACCAAGTGCCAGATCTACTGGCGCGAACACGCCTGGGCTCTTGA
AGATTGTGTGTGCCGGGTCTTCCAGAACGGCTGTCTTCTGAACGAGGAGA
GCAATCGGCGGGAAAAGGCTGGAAAAACCCCTCTAATTCCGGTCACCGAG
CAGGTGTGCCAGAAGTTCATCAAGCGCAAGTGCTTCCTTGGATGGCCTGT
GCTGGCCAAGTTCCCGATTCCATCGCCATGCGGATGCAATGGCAAACAGG
GCAGTCTGGAAATCAAGAAGTTTTTGAGTCTGTGCGAACTGCAGAAGTAC
GCAGCTGAATGCAACAAACCCTATATCAGCTACTCGAAGTGTTAAAAGCT
TTCTAGACCAT
BS28115.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:26:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7587-RA | 429 | CG7587-PA | 1..429 | 17..445 | 2145 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:26:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7587-RA | 550 | CG7587-RA | 38..469 | 17..448 | 2160 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:26:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 17594423..17594636 | 17..230 | 1070 | 100 | Plus |
3R | 32079331 | 3R | 17594702..17594890 | 231..419 | 945 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:26:23 has no hits.
BS28115.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:22 Download gff for
BS28115.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7587-RA | 43..464 | 22..443 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:53 Download gff for
BS28115.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7587-RA | 43..464 | 22..443 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:18:16 Download gff for
BS28115.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7587-RA | 43..464 | 22..443 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:18:16 Download gff for
BS28115.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 17594428..17594636 | 22..230 | 100 | -> | Plus |
3R | 17594702..17594890 | 231..419 | 100 | -> | Plus |
3R | 17594948..17594971 | 420..443 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:53 Download gff for
BS28115.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 13420150..13420358 | 22..230 | 100 | -> | Plus |
arm_3R | 13420424..13420612 | 231..419 | 100 | -> | Plus |
arm_3R | 13420670..13420693 | 420..443 | 100 | | Plus |
BS28115.pep Sequence
Translation from 16 to 444
> BS28115.pep
MFNIILLATILVSVAQATIIIKPENPVEETTKCQIYWREHAWALEDCVCR
VFQNGCLLNEESNRREKAGKTPLIPVTEQVCQKFIKRKCFLGWPVLAKFP
IPSPCGCNGKQGSLEIKKFLSLCELQKYAAECNKPYISYSKC*
BS28115.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:48:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7587-PA | 142 | CG7587-PA | 1..142 | 1..142 | 772 | 100 | Plus |
Sgs5-PA | 163 | CG7596-PA | 1..160 | 1..142 | 395 | 46.2 | Plus |
CG42823-PA | 151 | CG42823-PA | 38..143 | 32..138 | 145 | 33.6 | Plus |