BS28116.complete Sequence
1358 bp assembled on 2012-03-05
GenBank Submission: KX802487
> BS28116.complete
GAAGTTATCAGTCGACATGACTATGACTTCTACGGTGCTCCAACGGCCCA
TTCAAGCCAAGCCAGAGAAGAAGGCCTCCTCCAAATCGACCAGCTCCTCG
AGAAGCCGCTCCACGATGGCCTGGTCCAATGAGAAGCTGCGCTTCTCCTG
CATCGACAACATCGGACTCAAGCAGCTATGGAAGCTGATTGCCCTGGACA
CGAGTGCTTCATCCAAGCAGCGCAGTGCCATGATGTTGGAAGTGGAGCAA
CAGCAGCAACAGCAGCAGCAGCAGCAATCGAACAACAATAACGAGCGGAT
ACCCAACGAGAACTGCGACTATTTGAGTCTACAGAGATCGGGCCAGGCGC
CGAAGAATCACATCCAGGCGCAGGATCCGGCTCAGATGTCCCTGCTCAAG
TTCTTGGCCATTAATGCCCTAGAGCTGAGTGCCCCAGCAACGCCACATCT
CCTCCAGCATCAGCAGGCCCACAAGCAGGCGAAGCCACAGGGCTGGATGC
AGCTATCCGGTCACCCAGAGAGCATTGTTCCCACATCGACTGGAATAGTT
CGCAAACGGATCTCAGGACTGGAGGATAGCGAAGTACATGCCTACCGACT
GATCTGCAAGGAACCACAGACCGCTCAGATAGTGCCCGCCTACTTTGGAA
TACAGGAGATGCAATCACAGCACTTTATTGAGCTGCAGGATCTGCTGGCT
GGCTTTCGGGATCCGTGTGTGATGGACATCAAGATGGGCAGCCGCACCTT
TCTCGAATCGGAGGTCAGCAATGCCACGCTCAGACCGGACCTCTACCAGA
AGATGATCGCCGTGGATGCGGGAGCTCCCACGCCTGCGGAGCACGAGGCA
CGAGCGATCACCAAGCTGCGGTACATGACATTCCGGGAGTCCCTGTCCTC
CTCCCACTCCAAGGGTTTCCGGATCGAAGCACTGCGTCTGCGCGGACGAC
CGCCTGTCAAGGATTTGAAGACGTGCCGAAGCAGCGAGCAGATTGCCCAG
ACGATCGAACAGTTTCTGGCTGCTCGGCGATCCGTGCAAAAGGAGCTGCT
GAAGCGACTAAAGCACATGCGCCTGGTCATCGAACAGTCGACCTTCTTCG
CCAGCCACGAGATCATTGGCTCCAGCATCTTTATCGTCTACGATGACGAT
CGCGTTGGCGTTTGGCTAATTGACTTCGCCAAGTGCCGGGAGCTGCCACC
CCATGTGAGGGTGGACCATCGAAGTGCTTGGGCGCCTGGAAACCGAGAGG
AGGGTCTGCTACGCGGAATGGACGAGCTCATCCGCTCCTTCGAGGAGGTC
TACGCCCGCTGTGGCTCCCATCGCAGCTGCCTTAAAATCTAAAAGCTTTC
TAGACCAT
BS28116.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:26:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| IP3K1-RA | 1326 | CG4026-PA | 1..1326 | 17..1342 | 6615 | 99.9 | Plus |
| IP3K1-RB | 957 | CG4026-PB | 1..957 | 386..1342 | 4770 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:26:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| IP3K1-RA | 2055 | CG4026-RA | 402..1727 | 17..1342 | 6615 | 99.9 | Plus |
| IP3K1-RB | 1417 | CG4026-RB | 42..1089 | 295..1342 | 5225 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:26:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9787350..9788171 | 521..1342 | 4095 | 99.9 | Plus |
| 2L | 23513712 | 2L | 9782785..9783063 | 17..295 | 1395 | 100 | Plus |
| 2L | 23513712 | 2L | 9786684..9786802 | 294..412 | 595 | 100 | Plus |
| 2L | 23513712 | 2L | 9787150..9787259 | 413..522 | 550 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:26:42 has no hits.
BS28116.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:22 Download gff for
BS28116.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IP3K1-RA | 396..1719 | 17..1340 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:58 Download gff for
BS28116.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IP3K1-RA | 402..1725 | 17..1340 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:18:22 Download gff for
BS28116.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IP3K1-RA | 402..1725 | 17..1340 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:18:22 Download gff for
BS28116.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9782785..9783063 | 17..295 | 100 | -> | Plus |
| 2L | 9786686..9786802 | 296..412 | 100 | -> | Plus |
| 2L | 9787150..9787259 | 413..522 | 100 | -> | Plus |
| 2L | 9787352..9788169 | 523..1340 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:58 Download gff for
BS28116.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9782785..9783063 | 17..295 | 100 | -> | Plus |
| arm_2L | 9786686..9786802 | 296..412 | 100 | -> | Plus |
| arm_2L | 9787150..9787259 | 413..522 | 100 | -> | Plus |
| arm_2L | 9787352..9788169 | 523..1340 | 99 | | Plus |
BS28116.pep Sequence
Translation from 16 to 1341
> BS28116.pep
MTMTSTVLQRPIQAKPEKKASSKSTSSSRSRSTMAWSNEKLRFSCIDNIG
LKQLWKLIALDTSASSKQRSAMMLEVEQQQQQQQQQQSNNNNERIPNENC
DYLSLQRSGQAPKNHIQAQDPAQMSLLKFLAINALELSAPATPHLLQHQQ
AHKQAKPQGWMQLSGHPESIVPTSTGIVRKRISGLEDSEVHAYRLICKEP
QTAQIVPAYFGIQEMQSQHFIELQDLLAGFRDPCVMDIKMGSRTFLESEV
SNATLRPDLYQKMIAVDAGAPTPAEHEARAITKLRYMTFRESLSSSHSKG
FRIEALRLRGRPPVKDLKTCRSSEQIAQTIEQFLAARRSVQKELLKRLKH
MRLVIEQSTFFASHEIIGSSIFIVYDDDRVGVWLIDFAKCRELPPHVRVD
HRSAWAPGNREEGLLRGMDELIRSFEEVYARCGSHRSCLKI*
BS28116.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:48:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| IP3K1-PA | 441 | CG4026-PA | 1..441 | 1..441 | 2259 | 100 | Plus |
| IP3K1-PB | 318 | CG4026-PB | 1..318 | 124..441 | 1637 | 100 | Plus |
| IP3K2-PH | 467 | CG45017-PH | 150..431 | 149..430 | 528 | 40.6 | Plus |
| IP3K2-PC | 467 | CG45017-PC | 150..431 | 149..430 | 528 | 40.6 | Plus |
| IP3K2-PD | 467 | CG45017-PD | 150..431 | 149..430 | 528 | 40.6 | Plus |
