BS28117.complete Sequence
335 bp assembled on 2012-03-05
GenBank Submission: KX802083
> BS28117.complete
GAAGTTATCAGTCGACATGGACATAATACGCTGTGTAAATCAGCCGGAAA
ACTCGAAGAAACTCTCAGAGGCAAAGGCTTCCGCTGGAAAAGAGATGATT
CTCATGATGCAGCACGTTTTTCCATTGGTGATGCAACTCCAACTGGAGGT
CATTAAGGGTCATGGGTTTCCTGGAAACCGCGAGGGATTAGTCCAGTTCT
CCCAGCTCATCAGAGAAATGGAAAGGGACGACATGGAAATCGTACGCCTG
CGCAGTCAGATCCGCGCCATATACCTGCCCCCCATAGCTATAAACACCAC
CAACGACATCCTAATCTAAAAGCTTTCTAGACCAT
BS28117.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:26:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15387-RB | 351 | CG15387-PB | 49..351 | 17..319 | 1515 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:26:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15387-RB | 693 | CG15387-RB | 138..440 | 17..319 | 1515 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:26:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2225798..2226005 | 319..112 | 1025 | 99.5 | Minus |
2L | 23513712 | 2L | 2226057..2226157 | 117..17 | 505 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:26:57 has no hits.
BS28117.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:23 Download gff for
BS28117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15387-RA | 388..688 | 17..317 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:02 Download gff for
BS28117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15387-RB | 138..438 | 17..317 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:18:26 Download gff for
BS28117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15387-RB | 138..438 | 17..317 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:18:26 Download gff for
BS28117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2225800..2226001 | 116..317 | 100 | <- | Minus |
2L | 2226059..2226157 | 17..115 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:02 Download gff for
BS28117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2226059..2226157 | 17..115 | 100 | | Minus |
arm_2L | 2225800..2226001 | 116..317 | 100 | <- | Minus |
BS28117.pep Sequence
Translation from 16 to 318
> BS28117.pep
MDIIRCVNQPENSKKLSEAKASAGKEMILMMQHVFPLVMQLQLEVIKGHG
FPGNREGLVQFSQLIREMERDDMEIVRLRSQIRAIYLPPIAINTTNDILI
*
BS28117.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:48:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15387-PB | 116 | CG15387-PB | 17..116 | 1..100 | 501 | 100 | Plus |