BS28127.complete Sequence
290 bp assembled on 2012-03-05
GenBank Submission: KX805018
> BS28127.complete
GAAGTTATCAGTCGACATGCCTCGCAATCAAAACGCAGAGCAGGATAATC
CCTGCCTAAAGGAACAGGAGCTTTCATTTAAATGCCTCAACAAAAACAAC
TTTGATCGCGACAAGTGCGAAATATATTTTGCCAATTATAACAATTGCAA
GGAGTTCTGGAACAAAGTAAAAACCGAAAGGAGAGCCAAGGGAATAGCTC
CTTATTTGCCGCCCTTAGAAGAACGCGATGGGATTAAAGCAGAATATATG
AAAGGAAAACCCCAACAAAGCTGAAAGCTTTCTAGACCAT
BS28127.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:28:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4186-RB | 258 | CG4186-PB | 1..258 | 17..274 | 1290 | 100 | Plus |
CG4186-RA | 258 | CG4186-PA | 1..258 | 17..274 | 1290 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:28:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4186-RB | 444 | CG4186-RB | 56..313 | 17..274 | 1290 | 100 | Plus |
CG4186-RA | 386 | CG4186-RA | 56..313 | 17..274 | 1290 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:28:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 20769893..20770007 | 160..274 | 575 | 100 | Plus |
3L | 28110227 | 3L | 20769737..20769837 | 60..160 | 505 | 100 | Plus |
3L | 28110227 | 3L | 20769641..20769686 | 17..62 | 230 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:28:41 has no hits.
BS28127.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:27 Download gff for
BS28127.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4186-RA | 56..312 | 17..273 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:32 Download gff for
BS28127.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4186-RA | 56..312 | 17..273 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:18:56 Download gff for
BS28127.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4186-RA | 56..312 | 17..273 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:18:56 Download gff for
BS28127.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 20769641..20769685 | 17..61 | 100 | -> | Plus |
3L | 20769739..20769837 | 62..160 | 100 | -> | Plus |
3L | 20769894..20770006 | 161..273 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:32 Download gff for
BS28127.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 20762741..20762785 | 17..61 | 100 | -> | Plus |
arm_3L | 20762839..20762937 | 62..160 | 100 | -> | Plus |
arm_3L | 20762994..20763106 | 161..273 | 100 | | Plus |
BS28127.pep Sequence
Translation from 16 to 273
> BS28127.pep
MPRNQNAEQDNPCLKEQELSFKCLNKNNFDRDKCEIYFANYNNCKEFWNK
VKTERRAKGIAPYLPPLEERDGIKAEYMKGKPQQS*
BS28127.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:48:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4186-PB | 85 | CG4186-PB | 1..85 | 1..85 | 472 | 100 | Plus |
CG4186-PA | 85 | CG4186-PA | 1..85 | 1..85 | 472 | 100 | Plus |