BS28128.complete Sequence
638 bp assembled on 2012-03-05
GenBank Submission: KX804714
> BS28128.complete
GAAGTTATCAGTCGACATGGCAAAGTTTATAAATGAGATCGGTGAACTTC
TTGATTCCTGTAGAGCCCGAGAGGTTTTGATGGAGGTATTATGCCAAAGT
GCCCAATTGGTAATAGGATACCAAATCAATCAGAGTCCAGACCTAAACAA
TGTGGGTTCAGAAGACTCTGGGGAGCCACCTGTGCTTCGGTACACTGTGG
ACAGCGAACTGCACGACTATGAACCAGATCGCATTACGGCTCTATTGACG
GTGATGTCAAATACGGTGGATCTGCTTTTCTATCCCGTAGACACCATTTG
CTGGCTGGCCAGTCACAAAGTTTTCGATGTCAAAAAACAGAAGACCTGGC
GCTTTGTGAACTCGTTACTCAGCATGGTCTCTGCATACCTAAACGTCGTG
AGAATTTCAAGAATTTTCTTACAAGATGGCTATAAACTAAGTCACTTCGA
TGTTGTGTCCCTTGCACACTTTTTATTCGATCTGCTTCACAACATCTGCA
GTTTACCAAGGAGTTACCTGTGGGGCATGAAGCATTCATCCCTTTACTTG
GGAGTTATTGGCACCGTTTCTGCTGGACTGGGAATTTGCCAGATTTTGAC
CAAAAGAAGGCTGACCAAGTAGAAGCTTTCTACACCAT
BS28128.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:28:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33474-RB | 606 | CG33474-PB | 1..606 | 17..622 | 3030 | 100 | Plus |
| CG33474-RA | 606 | CG33474-PA | 1..606 | 17..622 | 3030 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:28:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33474-RB | 798 | CG33474-RB | 42..654 | 17..629 | 3050 | 99.8 | Plus |
| CG33474-RA | 1284 | CG33474-RA | 528..1140 | 17..629 | 3050 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:28:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10422233..10422845 | 17..629 | 3050 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:28:50 has no hits.
BS28128.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:28 Download gff for
BS28128.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33474-RA | 1..606 | 17..622 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:36 Download gff for
BS28128.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33474-RA | 528..1133 | 17..622 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:18:59 Download gff for
BS28128.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33474-RA | 528..1133 | 17..622 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:18:59 Download gff for
BS28128.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10422233..10422838 | 17..622 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:36 Download gff for
BS28128.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6309738..6310343 | 17..622 | 100 | | Plus |
BS28128.pep Sequence
Translation from 16 to 621
> BS28128.pep
MAKFINEIGELLDSCRAREVLMEVLCQSAQLVIGYQINQSPDLNNVGSED
SGEPPVLRYTVDSELHDYEPDRITALLTVMSNTVDLLFYPVDTICWLASH
KVFDVKKQKTWRFVNSLLSMVSAYLNVVRISRIFLQDGYKLSHFDVVSLA
HFLFDLLHNICSLPRSYLWGMKHSSLYLGVIGTVSAGLGICQILTKRRLT
K*
BS28128.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:48:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33474-PB | 201 | CG33474-PB | 1..201 | 1..201 | 1040 | 100 | Plus |
| CG33474-PA | 201 | CG33474-PA | 1..201 | 1..201 | 1040 | 100 | Plus |
| CG13827-PA | 233 | CG13827-PA | 6..233 | 3..201 | 415 | 39 | Plus |
| CG13827-PB | 234 | CG13827-PB | 20..234 | 16..201 | 377 | 38.6 | Plus |
