BS28134.complete Sequence
356 bp assembled on 2012-03-05
GenBank Submission: KX805624
> BS28134.complete
GAAGTTATCAGTCGACATGAAGAGCGACGAGATCATCGAGAAGATACGCA
ACAAGTTGAAGGAATCGGATCCTGCCCGGCGCACCGTCGTCAACACGTTT
CAGTTCAACTTCACCGATGCGGATGGTAATCTCATCAAGAGCATGGCGTT
GGACATCTACGAGGGGAGTGCCACCAGTGTCGATGCACAGGTCACCATTT
CCGATGAGGACTTCTACTTGGTGGGCACTAAGCAGAAGACTTTCCAGGAG
GTGTTGCAGCAGGAGAAGGCTAAGATCGATGGCGATGAGGAGGCTATCAA
CAAAATGCTGGAGAAGTTTCGCATAAATTCTCAAAACTAGAAGCTTTCTA
GACCAT
BS28134.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:27:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12269-RA | 324 | CG12269-PA | 1..324 | 17..340 | 1620 | 100 | Plus |
| CG12269-RB | 339 | CG12269-PB | 1..339 | 17..340 | 1435 | 95.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:27:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12269-RA | 462 | CG12269-RA | 35..360 | 15..340 | 1630 | 100 | Plus |
| CG12269-RB | 477 | CG12269-RB | 35..375 | 15..340 | 1445 | 95.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:27:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18978375..18978569 | 340..146 | 975 | 100 | Minus |
| 3R | 32079331 | 3R | 18978644..18978775 | 146..15 | 660 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 08:27:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 5634..5667 | 323..356 | 107 | 79.4 | Plus |
BS28134.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:24 Download gff for
BS28134.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12269-RA | 37..360 | 17..340 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:11 Download gff for
BS28134.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12269-RA | 37..360 | 17..340 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:18:33 Download gff for
BS28134.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12269-RA | 37..360 | 17..340 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:18:33 Download gff for
BS28134.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18978375..18978568 | 147..340 | 100 | <- | Minus |
| 3R | 18978644..18978773 | 17..146 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:11 Download gff for
BS28134.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14804097..14804290 | 147..340 | 100 | <- | Minus |
| arm_3R | 14804366..14804495 | 17..146 | 100 | | Minus |
BS28134.pep Sequence
Translation from 16 to 339
> BS28134.pep
MKSDEIIEKIRNKLKESDPARRTVVNTFQFNFTDADGNLIKSMALDIYEG
SATSVDAQVTISDEDFYLVGTKQKTFQEVLQQEKAKIDGDEEAINKMLEK
FRINSQN*
BS28134.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:48:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12269-PA | 107 | CG12269-PA | 1..107 | 1..107 | 533 | 100 | Plus |
| CG12269-PB | 112 | CG12269-PB | 1..112 | 1..107 | 517 | 95.5 | Plus |
