BS28136.complete Sequence
905 bp assembled on 2012-03-05
GenBank Submission: KX805918
> BS28136.complete
GAAGTTATCAGTCGACATGAATTCATTACCAATACTGCAATCAGTGGACC
AAAATTTATCGTGCAAGGCAGCAGGAATAAGTAAAATGGAAAACACTAAA
CCAAATGATAAGAAACTGGCACAATCAAAGTTCGCATTCAAACATAACGG
GCCAAAAAAAGTGTTTCACTGCACGATGCAGAGTGTTTTGCAATCCGAAG
ATTGCTGGATCGCTGAGGAAGTTCTAGAAGAATCAAACGAGAAAAGCAAT
CTGGAACTCGAAGATATTTACGATGAGGTGTTTCGCTTAAAGCGGCGCGT
AAATCGACTCAATTACCAACTAGGTACCAATATACCGGAATGCCCAAAAA
TAGATCCCTGCCTGGATGATCATATATTTTTGACAAATGTAAAGGAAGTT
CATCCCGAAATTCTTCAGCTGAAGTTTGCAAGCCATAAACTACAGCACCA
ACTGACTCAGATGCAATCCGTCCGAAGATCATCCAATCTGGCCAAAAAAC
TGGTACGGGATGAATACTGCAGAAGCAAGAAATTAGGGGATCAGTTGCAG
ATTGAAATTCAAAAACTAGACTCCTTTAAGCTCAAATTCGAAAAACATCA
AGGACTATGTCTTCAACGGTTTAGGTTCTTGGACCAAGATAAGTATACTG
GCAGGGAGTTCTATGAATTTATAGAAAAAAGTAATGAGATGATAACAACT
CAACTTAAAAAGCAGATGTTAAAGAGTGAATACAAACCTTTTCGGAAGGA
AGCCGCTAGGGTGACAATCTCTTTAAAAACAGCCGCGGAAAATTTGCAAG
ATTATCTTTCAAGCGTGATAAATAACAAAAAATGTGAAATCTTCCAGAAC
GTGAAAAATTCCTGTGTATCCATTCGTTCAGACCTCTAAAAGCTTTCTAG
ACCAT
BS28136.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:27:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1138-RA | 873 | CG1138-PA | 1..873 | 17..889 | 4350 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:27:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1138-RA | 1398 | CG1138-RA | 87..959 | 17..889 | 4350 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:27:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 6597064..6597936 | 889..17 | 4350 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:27:48 has no hits.
BS28136.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:25 Download gff for
BS28136.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1138-RA | 87..956 | 17..887 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:19 Download gff for
BS28136.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1138-RA | 87..956 | 17..887 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:18:43 Download gff for
BS28136.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1138-RA | 87..956 | 17..887 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:18:43 Download gff for
BS28136.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 6597066..6597936 | 17..887 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:19 Download gff for
BS28136.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 2422788..2423658 | 17..887 | 99 | | Minus |
BS28136.pep Sequence
Translation from 16 to 888
> BS28136.pep
MNSLPILQSVDQNLSCKAAGISKMENTKPNDKKLAQSKFAFKHNGPKKVF
HCTMQSVLQSEDCWIAEEVLEESNEKSNLELEDIYDEVFRLKRRVNRLNY
QLGTNIPECPKIDPCLDDHIFLTNVKEVHPEILQLKFASHKLQHQLTQMQ
SVRRSSNLAKKLVRDEYCRSKKLGDQLQIEIQKLDSFKLKFEKHQGLCLQ
RFRFLDQDKYTGREFYEFIEKSNEMITTQLKKQMLKSEYKPFRKEAARVT
ISLKTAAENLQDYLSSVINNKKCEIFQNVKNSCVSIRSDL*
BS28136.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:48:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1138-PA | 290 | CG1138-PA | 1..290 | 1..290 | 1500 | 100 | Plus |