Clone BS28137 Report

Search the DGRC for BS28137

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:281
Well:37
Vector:pDNR-Dual
Associated Gene/TranscriptCG4661-RA
Protein status:BS28137.pep: gold
Sequenced Size:1934

Clone Sequence Records

BS28137.complete Sequence

1934 bp assembled on 2012-04-11

GenBank Submission: KX803833

> BS28137.complete
GAAGTTATCAGTCGACATGTCATCTAGATTCAAGTCGAGAATTCCGGAAC
GCGTTAGACACTCGCTAACGGTACTGGATGGTCCAAACTCGCGGATATCC
CGCATCCGTGATGCCGCGCTACCAAATCGCTGCTCGCTGAACCGCTCCCA
TTTGCCGATGCCAATAAGCAATACGCTGAGCGCTCTGGTGAAGCCAGTAT
CGCCGAAAGTTGTATTTAAGAAAACGCTAACGGATGAGGAAGCGGTAATC
CGCTCGCTGGTGCGACGTTCAAAACCGCTGGCAGTTCGTGGCAATCGTAC
ATCCTTTCGCCGCATTCAATTGGCTCACGCTGCGCCAATTGACGATTCTT
CCGTGCTGTTGAAAGCCACCAATAGCTTTTGCAGCACCAATTTTCAGCTG
CAAAAGCCCATAAAGGAGGCAAGTCCGGGTGCCACAGAGAAGGATCGTGC
CGCTAACAAAGTGAGGTCCGCAAAAAGTCTGCTGGATCTGGTGGCCGGAA
GAAGGCAACCGGGTATGGAACAAATACGTTTCCTTTGCAGCGATCATCGC
CTGATCAATGTGCCCAGTCCCTTGATGTATCGCCATTCGGAGGTGATGAG
CCGTTTGGAAGGGGAGGTGCAGCCAATTCCGTTGCGGTCCATTCGATCGG
CGACACTGCTACGTGTGATTATGTGGATGCACAAGAAGACTCTATGCGCA
AACGGAACTGAAAAAATCGCCGCGCCGACACCAACAGTTGAGACGTGCAT
TTGCGAAATAGGCAAAGGAAACGGATATACGAAAAGCGAGGCCAGCTGTC
AAATCAGTGAGAACACTCAAGGTAATGCTCAACAAACGGTAAATTTAACA
TGTCAGATCCTCGGCGAAAAAATCGAAAATGATTGCACAAAAATACTTAA
GAATGTAGAATTTGATTATGACCATACACCGATTAGAAATGATAATATCG
AGAATAGTTGTGAAAACAATGATGAAAGTGTTAATGACGAGGCAGGTGTT
ATAAGCAATCAAACAAGCGACTCAATGGAAAGTTTCGAAAATAACTTGCA
AAATCAAGAAAATTTTATGGTCGAATGTTCTACAGATATCAAATGTAATG
ATTACAAACAAAACGAAAATCAAAAAGACGAGAACTGCACAATTATAGAT
GAAAATAATGGAAAGTTAGTGTTATATAATCCAAACATTCAATTAATTCA
AAATAACGAAAACACAAACAAAAGTAGTAGAGATTGCAAGAATGATACAA
TTAATGAATTCACAAAAGTAAATGGTAACTATCAAGATTACATTCAAATT
ACCGAAATTGGCAATAATAATATCACAGGTGTAAATACTGGCGAAGATGA
ACGTGAAATCGGTTGCTTAAAAAGCACGGATAAAATCGTAATTCATGCCA
ATGTGATGCAAAATTTTTGTAAACGAAATATATGGAAATGCAATGGGATT
AGAAGGTGTACAGGCGAGGATGCCAACGATGATCAATGCGTTGCTAACTT
AAATGAAATGAAGCGTTCCTCATTTCTTCTTTGCTCATGGGAAGAGCGAT
TGTTGGGCAGCGAACTGTACCAGCTGGTGGAAATTATCCTGGCGTCTCAT
TATTTGGGCATCGAGTCGCTGACACTGAACGCCATTCATCATTTCTGTGA
ACTAATGGCTCAAAGGACTCGCTCGGAATGCTGCCTAATGCTAGGGATCA
AGACACGATTGGCTAGTGAGCGCCAAACTTTGGATAACCACTGTCCGTTG
ATCAGGGACTCACTGTCGCGAAATAATCAAGCAGATAGGACCGAAAATAT
GAAGCAGCAATTTGAATCCAGAATCTTCAGGAAACCACAACCGAACGGAA
AGGCAGCTGTAGGAGGTGGAATGGGAGATGGACTTTATGCCAAAAAGCCT
CGCAGTCGCAACCATTAGAAGCTTTCTAGACCAT

BS28137.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:33:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG4661-RA 1902 CG4661-PA 1..1902 17..1918 9510 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:33:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG4661-RA 2035 CG4661-RA 62..1965 15..1918 9520 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:33:54
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 12855758..12857661 1918..15 9520 100 Minus
Blast to na_te.dros performed on 2014-11-28 04:33:55 has no hits.

BS28137.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-11 12:37:20 Download gff for BS28137.complete
Subject Subject Range Query Range Percent Splice Strand
CG4661-RA 64..1965 17..1918 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:52 Download gff for BS28137.complete
Subject Subject Range Query Range Percent Splice Strand
CG4661-RA 64..1965 17..1918 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:31:43 Download gff for BS28137.complete
Subject Subject Range Query Range Percent Splice Strand
CG4661-RA 64..1965 17..1918 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:31:43 Download gff for BS28137.complete
Subject Subject Range Query Range Percent Splice Strand
X 12855758..12857659 17..1918 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:52 Download gff for BS28137.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 12749791..12751692 17..1918 100   Minus

BS28137.pep Sequence

Translation from 16 to 1917

> BS28137.pep
MSSRFKSRIPERVRHSLTVLDGPNSRISRIRDAALPNRCSLNRSHLPMPI
SNTLSALVKPVSPKVVFKKTLTDEEAVIRSLVRRSKPLAVRGNRTSFRRI
QLAHAAPIDDSSVLLKATNSFCSTNFQLQKPIKEASPGATEKDRAANKVR
SAKSLLDLVAGRRQPGMEQIRFLCSDHRLINVPSPLMYRHSEVMSRLEGE
VQPIPLRSIRSATLLRVIMWMHKKTLCANGTEKIAAPTPTVETCICEIGK
GNGYTKSEASCQISENTQGNAQQTVNLTCQILGEKIENDCTKILKNVEFD
YDHTPIRNDNIENSCENNDESVNDEAGVISNQTSDSMESFENNLQNQENF
MVECSTDIKCNDYKQNENQKDENCTIIDENNGKLVLYNPNIQLIQNNENT
NKSSRDCKNDTINEFTKVNGNYQDYIQITEIGNNNITGVNTGEDEREIGC
LKSTDKIVIHANVMQNFCKRNIWKCNGIRRCTGEDANDDQCVANLNEMKR
SSFLLCSWEERLLGSELYQLVEIILASHYLGIESLTLNAIHHFCELMAQR
TRSECCLMLGIKTRLASERQTLDNHCPLIRDSLSRNNQADRTENMKQQFE
SRIFRKPQPNGKAAVGGGMGDGLYAKKPRSRNH*

BS28137.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:17:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG4661-PA 633 CG4661-PA 1..633 1..633 3311 100 Plus