BS28138.complete Sequence
422 bp assembled on 2012-03-05
GenBank Submission: KX802803
> BS28138.complete
GAAGTTATCAGTCGACATGGACTTGAAAATGGAGCTGGGCGGCTACGTGC
ACTCCGCACCCAACACCAAGCGCTTCGTTGTGGAGGACTCGATTACCAAG
GTGACCTCTGATGGGGAGCCGCACGGCATGATGACCATGGTGGCCGGATT
ATCCGGCCTTTTGGCGGCCATCATCATTTTGGCCGTCCTCGTGTCCATGG
TATCTTGTCGCAAGCAGAAGAGCACCAACCGGAAGAGCAATTCCTCCGCC
AATGTGGTGGCCATGACCAGTGTGGCGCAGGATCAGCCCCAGTTGGCCGG
TAACTTGAACGCAGCGTTCGCTGAGAGCACTCTGACCTTGGACAAGGTCA
AGCAGGACACAGAGGATCAATGGCGACCCACAGCCGTGGTGGTGGAGCGG
TACTAGAAGCTTTCTAGACCAT
BS28138.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:29:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13012-RE | 390 | CG13012-PE | 1..390 | 17..406 | 1950 | 100 | Plus |
| CG13012-RD | 390 | CG13012-PD | 1..390 | 17..406 | 1950 | 100 | Plus |
| CG13012-RC | 390 | CG13012-PC | 1..390 | 17..406 | 1950 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:29:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13012-RE | 1199 | CG13012-RE | 585..976 | 15..406 | 1960 | 100 | Plus |
| CG13012-RD | 740 | CG13012-RD | 126..517 | 15..406 | 1960 | 100 | Plus |
| CG13012-RC | 1234 | CG13012-RC | 620..1011 | 15..406 | 1960 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:29:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16669041..16669226 | 406..221 | 930 | 100 | Minus |
| X | 23542271 | X | 16669313..16669442 | 222..93 | 650 | 100 | Minus |
| X | 23542271 | X | 16670057..16670134 | 92..15 | 390 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:29:50 has no hits.
BS28138.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 16:16:31 Download gff for
BS28138.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13012-RB | 111..500 | 17..406 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:05 Download gff for
BS28138.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13012-RC | 622..1011 | 17..406 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:19:18 Download gff for
BS28138.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13012-RC | 622..1011 | 17..406 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:19:18 Download gff for
BS28138.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16669313..16669442 | 93..222 | 100 | <- | Minus |
| X | 16670057..16670132 | 17..92 | 100 | | Minus |
| X | 16669041..16669224 | 223..406 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:05 Download gff for
BS28138.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16563074..16563257 | 223..406 | 100 | <- | Minus |
| arm_X | 16563346..16563475 | 93..222 | 100 | <- | Minus |
| arm_X | 16564090..16564165 | 17..92 | 100 | | Minus |
BS28138.pep Sequence
Translation from 16 to 405
> BS28138.pep
MDLKMELGGYVHSAPNTKRFVVEDSITKVTSDGEPHGMMTMVAGLSGLLA
AIIILAVLVSMVSCRKQKSTNRKSNSSANVVAMTSVAQDQPQLAGNLNAA
FAESTLTLDKVKQDTEDQWRPTAVVVERY*
BS28138.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:49:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13012-PE | 129 | CG13012-PE | 1..129 | 1..129 | 640 | 100 | Plus |
| CG13012-PD | 129 | CG13012-PD | 1..129 | 1..129 | 640 | 100 | Plus |
| CG13012-PC | 129 | CG13012-PC | 1..129 | 1..129 | 640 | 100 | Plus |
| CG13012-PB | 129 | CG13012-PB | 1..129 | 1..129 | 640 | 100 | Plus |
